RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CDC42P60953 191 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 SMIM21Q3B7S5 101 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 FDX2Q6P4F2 183 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 CCDC121Q6ZUS5 278 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 ZNF573Q86YE8 665 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 TRUB1Q8WWH5 349 aaKnown RBP10.64□□□□□ -0.71
NPAS3-209ENST00000551008 WFDC12Q8WWY7 111 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 RNFT2Q96EX2 444 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 PKIBQ9C010 78 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 MTCH1Q9NZJ7 389 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 FRRS1LQ9P0K9 344 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 IL36RNQ9UBH0 155 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 GNG8Q9UK08 70 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 EXOGQ9Y2C4 368 aaKnown RBP10.64□□□□□ -0.71
NPAS3-209ENST00000551008 TRBV23-1A0A0A0MS06 115 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 SYT7O43581 403 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 ZNF737O75373 536 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 PRDX2P32119 198 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 RAG2P55895 527 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 DLX6P56179 175 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 ZNF91Q05481 1191 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 IL24Q13007 206 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 ZNF273Q14593 569 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 PRR31Q5SQ13 230 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 SHISA2Q6UWI4 295 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 TCF23Q7RTU1 214 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 ENTHD1Q8IYW4 607 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 CMTM4Q8IZR5 234 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 OR51A4Q8NGJ6 313 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 RFKQ969G6 155 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 LGALS12Q96DT0 336 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 PELI1Q96FA3 418 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 METTL8Q9H825 291 aaKnown RBP10.63□□□□□ -0.71
NPAS3-209ENST00000551008 S100A14Q9HCY8 104 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 IMPAD1Q9NX62 359 aa10.63□□□□□ -0.71
NPAS3-209ENST00000551008 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.63□□□□□ -0.71
NPAS3-209ENST00000551008 FAM230AA0A1W2PPH8 454 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 A0A1W2PQ09 198 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 OR4C45A6NMZ5 311 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 POM121CA8CG34 1229 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 SLC16A6O15403 523 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 SPRY1O43609 319 aaPredicted RBP10.62□□□□□ -0.71
NPAS3-209ENST00000551008 NXPH2O95156 264 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 KNG1P01042 644 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 DBTP11182 482 aaKnown RBP10.62□□□□□ -0.71
NPAS3-209ENST00000551008 CCL3L1P16619 93 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 PAX6P26367 422 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 UBE2E1P51965 193 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 TMEM200BQ69YZ2 307 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 MKXQ8IYA7 352 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 FAM185AQ8N0U4 392 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 PQLC1Q8N2U9 271 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 ZNF561Q8N587 486 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 SGMS2Q8NHU3 365 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 APH1BQ8WW43 257 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 SLAMF9Q96A28 289 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 SLITRK2Q9H156 845 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 MYRFQ9Y2G1 1151 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 POLDIP2Q9Y2S7 368 aa10.62□□□□□ -0.71
NPAS3-209ENST00000551008 TMEM82A0PJX8 343 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 E9PI62 339 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 IGHA1P01876 353 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 TK1P04183 234 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 ISG15P05161 165 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 UBCP0CG48 685 aaKnown RBP10.61□□□□□ -0.71
NPAS3-209ENST00000551008 ATP6V1E1P36543 226 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 NPBWR2P48146 333 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 GUCA2AQ02747 115 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 LDLRAD2Q5SZI1 272 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 OR4M1Q8NGD0 313 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 RHOXF1Q8NHV9 184 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 DYRK2Q92630 601 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 C4orf36Q96KX1 117 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 ZNF696Q9H7X3 374 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 ISG20L2Q9H9L3 353 aaKnown RBP10.61□□□□□ -0.71
NPAS3-209ENST00000551008 PLEKHA1Q9HB21 404 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 OR14J1Q9UGF5 321 aa10.61□□□□□ -0.71
NPAS3-209ENST00000551008 IGKV1-12A0A0C4DH73 117 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 MEX3AA1L020 520 aaKnown RBP10.6□□□□□ -0.71
NPAS3-209ENST00000551008 K7N7A8 449 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 IGKV1D-12P01611 117 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 FBP1P09467 338 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 BMXP51813 675 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 FUT6P51993 359 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 CAPZA1P52907 286 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 PROK1P58294 105 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 RPL15P61313 204 aaKnown RBP10.6□□□□□ -0.71
NPAS3-209ENST00000551008 RPL31P62899 125 aaKnown RBP10.6□□□□□ -0.71
NPAS3-209ENST00000551008 ACTC1P68032 377 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 ACTA1P68133 377 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 COL10A1Q03692 680 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 MEDAGQ5VYS4 303 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 NCR3LG1Q68D85 454 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 C17orf107Q6ZR85 190 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 Q6ZSV7 163 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 SLC25A26Q70HW3 274 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 UTS2BQ765I0 119 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 FAM220AQ7Z4H9 259 aa10.6□□□□□ -0.71
NPAS3-209ENST00000551008 ACBD7Q8N6N7 88 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms