RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SYNGR1O43759 233 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 RBP4P02753 201 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 CHRM2P08172 466 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 OR12D2P58182 307 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 BCL2L15Q5TBC7 163 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 TMEM236Q5W0B7 351 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 GDPD3Q7L5L3 318 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 NDUFA11Q86Y39 141 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 ASCC1Q8N9N2 400 aaKnown RBP18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 PIFOQ8TCI5 191 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 R3HDM4Q96D70 268 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 GPR173Q9NS66 373 aa18.68■□□□□ 0.58
SMARCD1-209ENST00000550477 DHRS7CA6NNS2 312 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 C17orf98A8MV24 154 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 CHST1O43916 411 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 TTRP02766 147 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 PIPP12273 146 aaPredicted RBP18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 PRKACGP22612 351 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 PAX6P26367 422 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 CRISP1P54107 249 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 ZNF273Q14593 569 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 ZNF322Q6U7Q0 402 aaPredicted RBP18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 LHFPL4Q7Z7J7 247 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 Q8N2B8 174 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 MRAPQ8TCY5 172 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 THTPAQ9BU02 230 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 PKIBQ9C010 78 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 ZNF702PQ9H963 129 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 SLC22A13Q9Y226 551 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 SNX5Q9Y5X3 404 aa18.67■□□□□ 0.58
SMARCD1-209ENST00000550477 NOTCH3Q9UM47 2321 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 PQLC2LA1A4F0 135 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 K7N7A8 449 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 FAM107AO95990 144 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 ZNF728P0DKX0 622 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 CEBPDP49716 269 aaPredicted RBP18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 GYS2P54840 703 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 EDDM3BP56851 147 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 CXCR4P61073 352 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 IL24Q13007 206 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 DYNC1I2Q13409 638 aaKnown RBP18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 SSX2Q16385 188 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 PLA1AQ53H76 456 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 TMEM42Q69YG0 159 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 ELMOD2Q8IZ81 293 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 PLEKHA1Q9HB21 404 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 HES4Q9HCC6 221 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 PAPOLBQ9NRJ5 636 aaKnown RBP18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 NECAP2Q9NVZ3 263 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 DNAJB9Q9UBS3 223 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 OR52A1Q9UKL2 312 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 R4GMQ9 66 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 V9GYS6 101 aa18.66■□□□□ 0.58
SMARCD1-209ENST00000550477 ZNF670-ZNF695F2Z2N8 137 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 MPZP25189 248 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 RAB13P51153 203 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 LOXL3P58215 753 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 CBX1P83916 185 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 MEPCEQ7L2J0 689 aaKnown RBP18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 HS3ST5Q8IZT8 346 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 LYG1Q8N1E2 194 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 NRBF2Q96F24 287 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 TTTY10Q9BZA0 68 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 SERTAD4Q9NUC0 356 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 COPS3Q9UNS2 423 aa18.65■□□□□ 0.58
SMARCD1-209ENST00000550477 CCDC182A6NF36 153 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 F2RL2O00254 374 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 PRB2P02812 416 aaPredicted RBP18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 CD28P10747 220 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 COL10A1Q03692 680 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 MEF2CQ06413 473 aaPredicted RBP18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 MFGE8Q08431 387 aaPredicted RBP18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 ZNF626Q68DY1 528 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 Q6ZPA2 131 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 SPATA24Q86W54 205 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 OR11H6Q8NGC7 330 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 ZNF714Q96N38 554 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 ADI1Q9BV57 179 aa18.64■□□□□ 0.57
SMARCD1-209ENST00000550477 FAM230AA0A1W2PPH8 454 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 hADV38S2A0JD32 116 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 MEGF11A6BM72 1044 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 A6NDX4 124 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 SERPINA3P01011 423 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 IGHV1-8P0DP01 117 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 DYNLT3P51808 116 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 OXLD1Q5BKU9 147 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 SLX4IPQ5VYV7 408 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 HIST2H2BDQ6DRA6 164 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 ZBTB49Q6ZSB9 765 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 ANGPTL5Q86XS5 388 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 SLC35F2Q8IXU6 374 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 BATF2Q8N1L9 274 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 CCDC197Q8NCU1 140 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 OR14K1Q8NGZ2 314 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 SNX22Q96L94 193 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 APOL4Q9BPW4 351 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 MMP28Q9H239 520 aa18.63■□□□□ 0.57
SMARCD1-209ENST00000550477 GATBO75879 557 aaKnown RBP18.62■□□□□ 0.57
SMARCD1-209ENST00000550477 DNAJC8O75937 253 aaPredicted RBP18.62■□□□□ 0.57
SMARCD1-209ENST00000550477 AZGP1P25311 298 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms