RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SLC1A7O00341 560 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 RPSAP08865 295 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 CCDC159P0C7I6 412 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 NDUFB7P17568 137 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 ARF6P62330 175 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 GABPB1Q06547 395 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 IL18R1Q13478 541 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 OGFRL1Q5TC84 451 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 ANGPTL5Q86XS5 388 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 ZDHHC22Q8N966 263 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 DNAAF1Q8NEP3 725 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 ZNF48Q96MX3 618 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 ZNF649Q9BS31 505 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 COMMD4Q9H0A8 199 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 CNTD2Q9H8S5 307 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 HES4Q9HCC6 221 aa14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 FGF20Q9NP95 211 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-208ENST00000550102 IGKV1-27A0A075B6S5 117 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 A0A1W2PQ09 198 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 RFPL4AA6NLU0 287 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 RFPL4AL1F8VTS6 287 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 OCM2P0CE71 109 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 OCMP0CE72 109 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 LIMS3P0CW19 117 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 LIMS4P0CW20 117 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 PRKACBP22694 351 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 DCKP27707 260 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 CAPZA1P52907 286 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 GBX2P52951 348 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 UBA52P62987 128 aaKnown RBP14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 ADARB1P78563 741 aaKnown RBP14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 ZNF561Q8N587 486 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 ZNRF1Q8ND25 227 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 OR51A4Q8NGJ6 313 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 OR10AC1Q8NH08 325 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 GATAD2BQ8WXI9 593 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 SPSB1Q96BD6 273 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 FGGYQ96C11 551 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 CEP19Q96LK0 163 aa14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 ELL3Q9HB65 397 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-208ENST00000550102 TRBV23-1A0A0A0MS06 115 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 ZFPL1O95159 310 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 KNG1P01042 644 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 MYL12AP19105 171 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 AZGP1P25311 298 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 CAPGP40121 348 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 RBP2P50120 134 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 ATP1B3P54709 279 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 ERVK11-1P61568 191 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 BAMBIQ13145 260 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 RUSC1-AS1Q66K80 236 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 SLC25A26Q70HW3 274 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 VMO1Q7Z5L0 202 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 Q8IYB0 196 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 BATF2Q8N1L9 274 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 OR5AK2Q8NH90 309 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 LHX4Q969G2 390 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 SLAMF9Q96A28 289 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 DCLRE1BQ9H816 532 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 OR14J1Q9UGF5 321 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 MAB21L2Q9Y586 359 aa14.2□□□□□ -0.14
CHMP1A-208ENST00000550102 IGHV1-69DA0A0B4J2H0 117 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 IGKV1-9A0A0C4DH69 117 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 CENPVL3A0A0U1RRI6 287 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 E9PI62 339 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 H0YAE9 185 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 CYB5AP00167 134 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 IGHV1-69P01742 117 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 ATF1P18846 271 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 PRTN3P24158 256 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 PRDX2P32119 198 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 POU3F4P49335 361 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 CEBPDP49716 269 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 MTCP1P56278 107 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 TMPRSS11AQ6ZMR5 421 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 LHFPL2Q6ZUX7 228 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 C8orf59Q8N0T1 100 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 CD177Q8N6Q3 437 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 TSEN15Q8WW01 171 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 C1orf147Q96MC9 270 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 OPALINQ96PE5 141 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 NEK6Q9HC98 313 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 DIMT1Q9UNQ2 313 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 CAB39Q9Y376 341 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 EXOSC1Q9Y3B2 195 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 HSPE1-MOB4S4R3N1 261 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 ANK2Q01484 3957 aa14.19□□□□□ -0.14
CHMP1A-208ENST00000550102 TRBV2A0A0J9YWF9 115 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 MDFIC2A0A1B0GVS7 189 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 M0R1W7 72 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 GNAO1P09471 354 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 ETV1P50549 477 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 MED21Q13503 144 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 DEFB112Q30KQ8 113 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 METAP1DQ6UB28 335 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 MKXQ8IYA7 352 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 FAM185AQ8N0U4 392 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 OR13C9Q8NGT0 318 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 ZDHHC16Q969W1 377 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 SLC25A28Q96A46 364 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms