RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 WIF1Q9Y5W5 379 aa9.04□□□□□ -0.96
ERBB3-214ENST00000550070 COLCA2A8K830 154 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 FOXI3A8MTJ6 420 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 SMAD7O15105 426 aaKnown RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 KNG1P01042 644 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 CD5P06127 495 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 MYF5P13349 255 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 PTGER4P35408 488 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 ZNF468Q5VIY5 522 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 SLC25A47Q6Q0C1 308 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 BTNL8Q6UX41 500 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 OR14K1Q8NGZ2 314 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 ZNF596Q8TC21 504 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 RHBDD1Q8TEB9 315 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 NPRL2Q8WTW4 380 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 LIN37Q96GY3 246 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 MYO7BQ6PIF6 2116 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 IGKV1D-8A0A087WSZ0 117 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 A0A1W2PNR3 127 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 A0A1W2PRV1 198 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 LMO7DNF2Z398 122 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 ITGB1BP1O14713 200 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 RAMP1O60894 148 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 FBXO24O75426 580 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 FBP1P09467 338 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 PET100P0DJ07 73 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 ZNF708P17019 499 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 CCL1P22362 96 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 SULT1A2P50226 295 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 SUMO3P55854 103 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 TRA2AQ13595 282 aaKnown RBP eCLIP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 RBM39Q14498 530 aaKnown RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 NFAM1Q8NET5 270 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 PECRQ9BY49 303 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 SLC2A4RGQ9NR83 387 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 ARID1AO14497 2285 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 FIGNL2A6NMB9 653 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 FAM157AC9JC47 383 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 TRAF3IP2O43734 574 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 IGHG1P01857 330 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 HPNP05981 417 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 KLK2P20151 261 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 BLVRBP30043 206 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 CD80P33681 288 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 LTBRP36941 435 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 SELENOVP59797 346 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 PEA15Q15121 130 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 KISS1Q15726 138 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 TMEM268Q5VZI3 342 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 TCEAL6Q6IPX3 200 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 DOK3Q7L591 496 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 DTX1Q86Y01 620 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 SELENOHQ8IZQ5 122 aaKnown RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 ZNF283Q8N7M2 679 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 STT3BQ8TCJ2 826 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 CD300LFQ8TDQ1 290 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 EDARADDQ8WWZ3 215 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 ZNF501Q96CX3 271 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 LYZL4Q96KX0 146 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 NECAB3Q96P71 396 aaPredicted RBP9.03□□□□□ -0.96
ERBB3-214ENST00000550070 CNTNAP3Q9BZ76 1288 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 KLRF1Q9NZS2 232 aa9.03□□□□□ -0.96
ERBB3-214ENST00000550070 SDK1Q7Z5N4 2213 aa9.02□□□□□ -0.96
ERBB3-214ENST00000550070 MED12Q93074 2177 aa9.02□□□□□ -0.96
ERBB3-214ENST00000550070 RTTNQ86VV8 2226 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 NCOA6Q14686 2063 aaPredicted RBP9.02□□□□□ -0.97
ERBB3-214ENST00000550070 ETV2O00321 342 aaPredicted RBP9.02□□□□□ -0.97
ERBB3-214ENST00000550070 TAAR5O14804 337 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 CRYABP02511 175 aaKnown RBP9.02□□□□□ -0.97
ERBB3-214ENST00000550070 SMIM6P0DI80 62 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 CD27P26842 260 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 PTGFRP43088 359 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 TAS2R46P59540 309 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 PLPPR5Q32ZL2 321 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 PRAMEF20Q5VT98 475 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 DHRS11Q6UWP2 260 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 ANKRD37Q7Z713 158 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 SFT2D1Q8WV19 159 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 EMG1Q92979 244 aaKnown RBP9.02□□□□□ -0.97
ERBB3-214ENST00000550070 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.02□□□□□ -0.97
ERBB3-214ENST00000550070 PRDM6Q9NQX0 595 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 FGF21Q9NSA1 209 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 PPP4R1LQ9P1A2 415 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 C2CD4DB7Z1M9 353 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 ONECUT2O95948 504 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 SERPINA2P20848 420 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 RPL12P30050 165 aaKnown RBP9.02□□□□□ -0.97
ERBB3-214ENST00000550070 PTGDSP41222 190 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 ZNF41P51814 821 aaPredicted RBP9.02□□□□□ -0.97
ERBB3-214ENST00000550070 F2RL1P55085 397 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 IAH1Q2TAA2 248 aaPredicted RBP9.02□□□□□ -0.97
ERBB3-214ENST00000550070 PLXDC1Q8IUK5 500 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 SKA3Q8IX90 412 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 MRGPRX4Q96LA9 322 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 SULT4A1Q9BR01 284 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 OPA3Q9H6K4 179 aa9.02□□□□□ -0.97
ERBB3-214ENST00000550070 METTL12A8MUP2 240 aa9.01□□□□□ -0.97
ERBB3-214ENST00000550070 CST4P01036 141 aa9.01□□□□□ -0.97
ERBB3-214ENST00000550070 IFNA2P01563 188 aa9.01□□□□□ -0.97
ERBB3-214ENST00000550070 OR8U9P0C7N5 309 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms