RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 TRMT10CQ7L0Y3 403 aaKnown RBP2.5□□□□□ -2.01
SNRPF-202ENST00000549580 MRPL52Q86TS9 123 aaKnown RBP2.5□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF738Q8NE65 137 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 OR5T1Q8NG75 326 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 OR2L8Q8NGY9 312 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF461Q8TAF7 563 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 SYNPRQ8TBG9 265 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 METTL26Q96S19 204 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 TBL1YQ9BQ87 522 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 LLPHQ9BRT6 129 aaKnown RBP2.5□□□□□ -2.01
SNRPF-202ENST00000549580 ABCB9Q9NP78 766 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 C12orf4Q9NQ89 552 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 DNAJC27Q9NZQ0 273 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 ENOPH1Q9UHY7 261 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 USH1CQ9Y6N9 552 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 ENPP4Q9Y6X5 453 aa2.5□□□□□ -2.01
SNRPF-202ENST00000549580 C2orf16Q68DN1 1984 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 IGKV2D-24A0A075B6R9 120 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 IGHV3-49A0A0A0MS15 119 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 MKRN2OSH3BPM6 223 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 TOR1AO14656 332 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 HLA-DQB1P01920 261 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 MUC1P15941 1255 aaPredicted RBP2.49□□□□□ -2.01
SNRPF-202ENST00000549580 IL1RNP18510 177 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 KDELR2P33947 212 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 XKP51811 444 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 CDC20Q12834 499 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 PMVKQ15126 192 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 MAPRE2Q15555 327 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 ZBTB6Q15916 424 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 CLEC19AQ6UXS0 136 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 TMEM25Q86YD3 366 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 CRLF3Q8IUI8 442 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 BBS7Q8IWZ6 715 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 FAM9CQ8IZT9 166 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 SPICQ8N5J4 248 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 LRRC52Q8N7C0 313 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 OR2M7Q8NG81 312 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 OR4M2Q8NGB6 313 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 OR4K17Q8NGC6 315 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 RORBQ92753 470 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 ZMYND19Q96E35 227 aaPredicted RBP2.49□□□□□ -2.01
SNRPF-202ENST00000549580 L3HYPDHQ96EM0 354 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 LINC00167Q96N53 147 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF251Q9BRH9 671 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF649Q9BS31 505 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 SHCBP1LQ9BZQ2 653 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 SRRQ9GZT4 340 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 NXF2Q9GZY0 626 aaKnown RBP2.49□□□□□ -2.01
SNRPF-202ENST00000549580 HDHD2Q9H0R4 259 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 DSN1Q9H410 356 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 TSPOAP1O95153 1857 aa2.49□□□□□ -2.01
SNRPF-202ENST00000549580 DOCK9Q9BZ29 2069 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 ADAMTSL3P82987 1691 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CABIN1Q9Y6J0 2220 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CENPBD1B2RD01 187 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CLDN34H7C241 214 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 UPK1AO00322 258 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CDIPTO14735 213 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 UBDO15205 165 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 FABP7O15540 132 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CRXO43186 299 aaPredicted RBP2.48□□□□□ -2.01
SNRPF-202ENST00000549580 SHOX2O60902 331 aaPredicted RBP2.48□□□□□ -2.01
SNRPF-202ENST00000549580 MYO1DO94832 1006 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 RCBTB2O95199 551 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 SNAP29O95721 258 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 GP1BAP07359 652 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 OCMP0CE72 109 aaPredicted RBP2.48□□□□□ -2.01
SNRPF-202ENST00000549580 PSMB6P28072 239 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 GTF2H1P32780 548 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 ANP32AP39687 249 aaKnown RBP2.48□□□□□ -2.01
SNRPF-202ENST00000549580 TTPAP49638 278 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 PPP1CAP62136 330 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CD164Q04900 197 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 PRKCDQ05655 676 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 ZNF816Q0VGE8 651 aaPredicted RBP2.48□□□□□ -2.01
SNRPF-202ENST00000549580 EIF4EBP1Q13541 118 aaPredicted RBP2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CEACAM16Q2WEN9 425 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 LINC00303Q3SY05 128 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 ABCA11PQ4W5N1 156 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 RBM48Q5RL73 367 aaKnown RBP2.48□□□□□ -2.01
SNRPF-202ENST00000549580 FAM222AQ5U5X8 452 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 LINC00337Q8N6G1 96 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CCNYL1Q8N7R7 359 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 SLC25A29Q8N8R3 303 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 OR13G1Q8NGZ3 307 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 UBA3Q8TBC4 463 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 SUN5Q8TC36 379 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 NELFBQ8WX92 580 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 OR5P2Q8WZ92 322 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 SPACA5Q96QH8 159 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CDX2Q99626 313 aaPredicted RBP2.48□□□□□ -2.01
SNRPF-202ENST00000549580 DOK1Q99704 481 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 ANGPTL4Q9BY76 406 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 EURLQ9NYK6 297 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 C21orf62Q9NYP8 219 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 PRO0628Q9UI54 55 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 SNX24Q9Y343 169 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 CBY1Q9Y3M2 126 aa2.48□□□□□ -2.01
SNRPF-202ENST00000549580 ARID1AO14497 2285 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms