RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 REEP6Q96HR9 211 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 RARRES2Q99969 163 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 MMP24Q9Y5R2 645 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 ADAMTS9Q9P2N4 1935 aa12.01□□□□□ -0.49
HDAC7-228ENST00000548938 MED12Q93074 2177 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF814B7Z6K7 855 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 GATCO43716 136 aaKnown RBP12□□□□□ -0.49
HDAC7-228ENST00000548938 TRAF3IP2O43734 574 aaPredicted RBP12□□□□□ -0.49
HDAC7-228ENST00000548938 GPR137BO60478 399 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 OR5H8P0DN80 308 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 FCGR2AP12318 317 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF43P17038 809 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 ASCL1P50553 236 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 RAB5CP51148 216 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 SUCLG1P53597 346 aaKnown RBP12□□□□□ -0.49
HDAC7-228ENST00000548938 NHLH2Q02577 135 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 C17orf67Q0P5P2 114 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 CLINT1Q14677 625 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 CDPF1Q6NVV7 123 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 PGAM5Q96HS1 289 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 PBDC1Q9BVG4 233 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 PISDQ9UG56 409 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 RCL1Q9Y2P8 373 aaKnown RBP12□□□□□ -0.49
HDAC7-228ENST00000548938 RFNGQ9Y644 331 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 FER1L5A0AVI2 2057 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 RRP8O43159 456 aaKnown RBP12□□□□□ -0.49
HDAC7-228ENST00000548938 ECI1P42126 302 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 ALDH3B1P43353 468 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 RPS10P46783 165 aaKnown RBP12□□□□□ -0.49
HDAC7-228ENST00000548938 RSPO4Q2I0M5 234 aaPredicted RBP12□□□□□ -0.49
HDAC7-228ENST00000548938 C1QL4Q86Z23 238 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 TM2D1Q9BX74 207 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 PLEKHJ1Q9NW61 149 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF581Q9P0T4 197 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 ANXA10Q9UJ72 324 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 MRPS17Q9Y2R5 130 aaKnown RBP12□□□□□ -0.49
HDAC7-228ENST00000548938 DMRT1Q9Y5R6 373 aa12□□□□□ -0.49
HDAC7-228ENST00000548938 A0A1W2PNR3 127 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 WRBO00258 174 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 RAMP1O60894 148 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 ITGA3P26006 1051 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 CHATP28329 748 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 RRADP55042 308 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 TMEM187Q14656 261 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 PYY3Q5JQD4 70 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 SOHLH1Q5JUK2 328 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 SLC25A47Q6Q0C1 308 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 OR52M1Q8NGK5 317 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 MVB12AQ96EY5 273 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 S100A13Q99584 98 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 WDR77Q9BQA1 342 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-228ENST00000548938 PPP4R1LQ9P1A2 415 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 STRAPQ9Y3F4 350 aaKnown RBP11.99□□□□□ -0.49
HDAC7-228ENST00000548938 SDK1Q7Z5N4 2213 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 GPR37O15354 613 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 KLK2P20151 261 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 OPRM1P35372 400 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 MAS1LP35410 378 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 RAB1AP62820 205 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 OGFOD3Q6PK18 319 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 DBX2Q6ZNG2 339 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 HIST2H3AQ71DI3 136 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 SUMF2Q8NBJ7 301 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 SLC38A9Q8NBW4 561 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 NAA60Q9H7X0 242 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 DECR2Q9NUI1 292 aa11.99□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF729A6NN14 1252 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-228ENST00000548938 K7N7A8 449 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 QDPRP09417 244 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 HOXA5P20719 270 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 FXYD4P59646 89 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 PHLDA2Q53GA4 152 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 SLC16A14Q7RTX9 510 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 STT3BQ8TCJ2 826 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 RTN4IP1Q8WWV3 396 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-228ENST00000548938 MR1Q95460 341 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 MUCL1Q96DR8 90 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 NXT1Q9UKK6 140 aaKnown RBP11.98□□□□□ -0.49
HDAC7-228ENST00000548938 ASXL3Q9C0F0 2248 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF727A8MUV8 499 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 CCL20P78556 96 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 DEFB133Q30KQ1 61 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF574Q6ZN55 896 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-228ENST00000548938 APCDD1LQ8NCL9 501 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 OR5L1Q8NGL2 311 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 PFDN5Q99471 154 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 WNT16Q9UBV4 365 aa11.98□□□□□ -0.49
HDAC7-228ENST00000548938 NSG1A0A0A6YYJ2 146 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 F5H5K5 113 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 ZNF728P0DKX0 622 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 CD27P26842 260 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 ARL4DP49703 201 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 SUMO3P55854 103 aaPredicted RBP11.97□□□□□ -0.49
HDAC7-228ENST00000548938 ABCA11PQ4W5N1 156 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 GPR157Q5UAW9 335 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 ABCA7Q8IZY2 2146 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 POC1BQ8TC44 478 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 DYRK2Q92630 601 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 ZDHHC12Q96GR4 267 aa11.97□□□□□ -0.49
HDAC7-228ENST00000548938 JSRP1Q96MG2 331 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms