RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDX2-202ENST00000548877 LY6EQ16553 131 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 GLYATL3Q5SZD4 288 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 GPR107Q5VW38 600 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 ZNF788Q6ZQV5 615 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.98□□□□□ -0.65
CDX2-202ENST00000548877 ANKRD13BQ86YJ7 626 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 LYG1Q8N1E2 194 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 OR1M1Q8NGA1 313 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 OR56B2PQ8NGI1 322 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 OR8D4Q8NGM9 314 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 SRA1Q9HD15 236 aaKnown RBP10.98□□□□□ -0.65
CDX2-202ENST00000548877 DNAJC27Q9NZQ0 273 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 AASSQ9UDR5 926 aa10.98□□□□□ -0.65
CDX2-202ENST00000548877 DBTP11182 482 aaKnown RBP10.97□□□□□ -0.65
CDX2-202ENST00000548877 FAHP16930 419 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 ZNF3P17036 446 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 MYL12AP19105 171 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 NOS3P29474 1203 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 IRF3Q14653 427 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 TIMM50Q3ZCQ8 353 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 NXNL2Q5VZ03 156 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 DPY19L4Q7Z388 723 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 OR5D13Q8NGL4 314 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 OR9Q1Q8NGQ5 310 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 OR10Z1Q8NGY1 313 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 CITED2Q99967 270 aaPredicted RBP10.97□□□□□ -0.65
CDX2-202ENST00000548877 OCSTAMPQ9BR26 566 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 IFT27Q9BW83 186 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 MND1Q9BWT6 205 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 AMBNQ9NP70 447 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 CMC2Q9NRP2 79 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 MRPL22Q9NWU5 206 aaKnown RBP10.97□□□□□ -0.65
CDX2-202ENST00000548877 HAO2Q9NYQ3 351 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 DNAJB11Q9UBS4 358 aa10.97□□□□□ -0.65
CDX2-202ENST00000548877 DIMT1Q9UNQ2 313 aaKnown RBP10.97□□□□□ -0.65
CDX2-202ENST00000548877 EXOSC1Q9Y3B2 195 aaKnown RBP10.97□□□□□ -0.65
CDX2-202ENST00000548877 VGLL3A8MV65 326 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 INMTO95050 263 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 RENP00797 406 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 SELLP14151 372 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 IGLL1P15814 213 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 HTR1FP30939 366 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 IKZF1Q13422 519 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 DGUOKQ16854 277 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 TIGD6Q17RP2 521 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 CYB561A3Q8NBI2 242 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 PROKR2Q8NFJ6 384 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 OR4Q3Q8NH05 313 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 OR8S1Q8NH09 359 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 SEH1LQ96EE3 360 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 MED30Q96HR3 178 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 ERMAPQ96PL5 475 aaPredicted RBP10.96□□□□□ -0.65
CDX2-202ENST00000548877 GAFA1Q96PS6 74 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 NMNAT3Q96T66 252 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 FGF20Q9NP95 211 aaPredicted RBP10.96□□□□□ -0.65
CDX2-202ENST00000548877 ENPP5Q9UJA9 477 aa10.96□□□□□ -0.65
CDX2-202ENST00000548877 ANKRD30BLA7E2S9 258 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 PRR23D1E9PI22 279 aaPredicted RBP10.95□□□□□ -0.66
CDX2-202ENST00000548877 H3BMQ9 156 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 M0R129 80 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 SLC22A1O15245 554 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 SIGLEC5O15389 551 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 XRCC2O43543 280 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 PRR23D2P0DMB1 279 aaPredicted RBP10.95□□□□□ -0.66
CDX2-202ENST00000548877 CD33P20138 364 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 C21orf33P30042 268 aaPredicted RBP10.95□□□□□ -0.66
CDX2-202ENST00000548877 MAP2K4P45985 399 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 GP2P55259 537 aaKnown RBP10.95□□□□□ -0.66
CDX2-202ENST00000548877 AADACL4Q5VUY2 407 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 ANGPTL6Q8NI99 470 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 H1FXQ92522 213 aaKnown RBP10.95□□□□□ -0.66
CDX2-202ENST00000548877 RNFT2Q96EX2 444 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 B9D2Q9BPU9 175 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 FUNDC2Q9BWH2 189 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 INPP5EQ9NRR6 644 aa10.95□□□□□ -0.66
CDX2-202ENST00000548877 SLC25A10Q9UBX3 287 aaPredicted RBP10.95□□□□□ -0.66
CDX2-202ENST00000548877 TRBV23-1A0A0A0MS06 115 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 WI2-2373I1.2A0A1W2PRP0 233 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 OR6C68A6NDL8 312 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 NKX6-3A6NJ46 265 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 CDIPTO14735 213 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 MYL12BO14950 172 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 GABARAPO95166 117 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 ACAA1P09110 424 aaPredicted RBP10.94□□□□□ -0.66
CDX2-202ENST00000548877 HIST1H1CP16403 213 aaKnown RBP10.94□□□□□ -0.66
CDX2-202ENST00000548877 ATP6V1E1P36543 226 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 FAM3AP98173 230 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 CD83Q01151 205 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 COL10A1Q03692 680 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 FAM76BQ5HYJ3 339 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 LCN1P1Q5VSP4 162 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 CCBE1Q6UXH8 406 aaPredicted RBP10.94□□□□□ -0.66
CDX2-202ENST00000548877 OR5T2Q8NGG2 359 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 YIPF6Q96EC8 236 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 DDOQ99489 341 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 KCNJ15Q99712 375 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 JAM3Q9BX67 310 aa10.94□□□□□ -0.66
CDX2-202ENST00000548877 ISYNA1Q9NPH2 558 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms