RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SPACA5Q96QH8 159 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 JMJD8Q96S16 334 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 PDCD1LG2Q9BQ51 273 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 NRIP2Q9BQI9 281 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 SIRPDQ9H106 197 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 DNTTIP1Q9H147 329 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 CNTD2Q9H8S5 307 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 SIRT7Q9NRC8 400 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 INPP5EQ9NRR6 644 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 HHLA2Q9UM44 414 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 MAB21L2Q9Y586 359 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 TENM1Q9UKZ4 2725 aa13.02□□□□□ -0.33
DDX54-205ENST00000548786 IGKV1-9A0A0C4DH69 117 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 DNAJC9-AS1A6NH13 148 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 TRIM77I1YAP6 450 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 ZFPL1O95159 310 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 ISG15P05161 165 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 MPZP25189 248 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 PRDX2P32119 198 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 CAPGP40121 348 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 FUT6P51993 359 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 GBX2P52951 348 aaPredicted RBP13.01□□□□□ -0.33
DDX54-205ENST00000548786 SNU13P55769 128 aaKnown RBP13.01□□□□□ -0.33
DDX54-205ENST00000548786 GABPB1Q06547 395 aaPredicted RBP13.01□□□□□ -0.33
DDX54-205ENST00000548786 BAMBIQ13145 260 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 OR2G6Q5TZ20 316 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 XAF1Q6GPH4 301 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 RNF144BQ7Z419 303 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 FAM185AQ8N0U4 392 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 CCDC54Q8NEL0 328 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 OR13C9Q8NGT0 318 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 TSEN15Q8WW01 171 aaKnown RBP13.01□□□□□ -0.33
DDX54-205ENST00000548786 PP6455Q8WZ26 134 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 DCTN5Q9BTE1 182 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 PKIBQ9C010 78 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 FGF20Q9NP95 211 aaPredicted RBP13.01□□□□□ -0.33
DDX54-205ENST00000548786 C8orf4Q9NR00 106 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 TNFRSF19Q9NS68 423 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 MRPS18AQ9NVS2 196 aaKnown RBP13.01□□□□□ -0.33
DDX54-205ENST00000548786 RASL12Q9NYN1 266 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 MTCH1Q9NZJ7 389 aa13.01□□□□□ -0.33
DDX54-205ENST00000548786 CENPVL3A0A0U1RRI6 287 aa13□□□□□ -0.33
DDX54-205ENST00000548786 A0A1W2PRD5 423 aa13□□□□□ -0.33
DDX54-205ENST00000548786 A0A1W2PRF3 423 aa13□□□□□ -0.33
DDX54-205ENST00000548786 A0A1W2PRM7 423 aa13□□□□□ -0.33
DDX54-205ENST00000548786 CASQ2O14958 399 aaPredicted RBP13□□□□□ -0.33
DDX54-205ENST00000548786 SPRY1O43609 319 aaPredicted RBP13□□□□□ -0.33
DDX54-205ENST00000548786 ATF1P18846 271 aa13□□□□□ -0.33
DDX54-205ENST00000548786 AZGP1P25311 298 aaKnown RBP13□□□□□ -0.33
DDX54-205ENST00000548786 MTCP1P56278 107 aa13□□□□□ -0.33
DDX54-205ENST00000548786 UBA52P62987 128 aaKnown RBP13□□□□□ -0.33
DDX54-205ENST00000548786 IL24Q13007 206 aa13□□□□□ -0.33
DDX54-205ENST00000548786 DEFB112Q30KQ8 113 aa13□□□□□ -0.33
DDX54-205ENST00000548786 C8orf59Q8N0T1 100 aaPredicted RBP13□□□□□ -0.33
DDX54-205ENST00000548786 OR5D18Q8NGL1 313 aa13□□□□□ -0.33
DDX54-205ENST00000548786 OR5AK2Q8NH90 309 aa13□□□□□ -0.33
DDX54-205ENST00000548786 CEP19Q96LK0 163 aa13□□□□□ -0.33
DDX54-205ENST00000548786 MYCBPQ99417 103 aaPredicted RBP13□□□□□ -0.33
DDX54-205ENST00000548786 COMMD4Q9H0A8 199 aa13□□□□□ -0.33
DDX54-205ENST00000548786 IL36RNQ9UBH0 155 aa13□□□□□ -0.33
DDX54-205ENST00000548786 CLEC2DQ9UHP7 191 aa13□□□□□ -0.33
DDX54-205ENST00000548786 ANK2Q01484 3957 aa13□□□□□ -0.33
DDX54-205ENST00000548786 TRBV2A0A0J9YWF9 115 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 MEX3AA1L020 520 aaKnown RBP12.99□□□□□ -0.33
DDX54-205ENST00000548786 SLC1A7O00341 560 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 NOS1APO75052 506 aaPredicted RBP12.99□□□□□ -0.33
DDX54-205ENST00000548786 MYL12AP19105 171 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 SOX2P48431 317 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 RBP2P50120 134 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 ATP1B3P54709 279 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 KLRD1Q13241 179 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 ASCC1Q8N9N2 400 aaKnown RBP12.99□□□□□ -0.33
DDX54-205ENST00000548786 LY6G5BQ8NDX9 201 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 OR4M1Q8NGD0 313 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 TAF15Q92804 592 aaKnown RBP eCLIP12.99□□□□□ -0.33
DDX54-205ENST00000548786 EMG1Q92979 244 aaKnown RBP12.99□□□□□ -0.33
DDX54-205ENST00000548786 ZDHHC16Q969W1 377 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 C10orf35Q96D05 121 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 SDSLQ96GA7 329 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 C1orf147Q96MC9 270 aaPredicted RBP12.99□□□□□ -0.33
DDX54-205ENST00000548786 OPALINQ96PE5 141 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 VCXQ9H320 206 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 DCLRE1BQ9H816 532 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 HES4Q9HCC6 221 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 C19orf12Q9NSK7 152 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 RBFOX1Q9NWB1 397 aaKnown RBP12.99□□□□□ -0.33
DDX54-205ENST00000548786 DHDHQ9UQ10 334 aa12.99□□□□□ -0.33
DDX54-205ENST00000548786 IGHV1-69DA0A0B4J2H0 117 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 TMEM212A6NML5 194 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 GPR37O15354 613 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 ANGPTL7O43827 346 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 XPNPEP2O43895 674 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 IGHV1-69P01742 117 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 CCDC159P0C7I6 412 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 PIPP12273 146 aaPredicted RBP12.98□□□□□ -0.33
DDX54-205ENST00000548786 BCL3P20749 454 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 PRKACBP22694 351 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 DCKP27707 260 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 NPBWR2P48146 333 aa12.98□□□□□ -0.33
DDX54-205ENST00000548786 CAV3P56539 151 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms