RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CDKL3Q8IVW4 592 aaPredicted RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF567Q8N184 647 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 C2orf73Q8N5S3 287 aaPredicted RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 MDS2Q8NDY4 140 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 B3GNT7Q8NFL0 401 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 OR1S2Q8NGQ3 325 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 OR13C4Q8NGS5 318 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 OR2G2Q8NGZ5 317 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 OR8K3Q8NH51 312 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 LILRB4Q8NHJ6 448 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 FAM57AQ8TBR7 257 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 NAT14Q8WUY8 206 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 PSMF1Q92530 271 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 NRGNQ92686 78 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 SGK3Q96BR1 496 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 AURKBQ96GD4 344 aaPredicted RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 SMIM10Q96HG1 83 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 PRRC1Q96M27 445 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 CCDC42Q96M95 316 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 QKIQ96PU8 341 aaKnown RBP eCLIP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 SH3GL3Q99963 347 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 TBL1YQ9BQ87 522 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 ANKRD60Q9BZ19 345 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 DRC3Q9H069 523 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 MRPS30Q9NP92 439 aaKnown RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 MRPL22Q9NWU5 206 aaKnown RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 GNPTGQ9UJJ9 305 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF835Q9Y2P0 537 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 KLF13Q9Y2Y9 288 aaPredicted RBP2.63□□□□□ -1.99
PTCH1-216ENST00000548379 COMMD3-BMI1R4GMX3 469 aa2.63□□□□□ -1.99
PTCH1-216ENST00000548379 TMEM131Q92545 1883 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 IGLV3-16A0A075B6K0 115 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 TRAV39A0A0B4J263 110 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 SLC5A10A0PJK1 596 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 FAM166BA8MTA8 275 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 GOLGA6L19H0YKK7 550 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 APOC4-APOC2K7ER74 178 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 NDUFS8O00217 210 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 DLGAP1O14490 977 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 BCKDKO14874 412 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 EIF3GO75821 320 aaKnown RBP eCLIP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 TSPAN13O95857 204 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 C6orf47O95873 294 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 APOC2P02655 101 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 CRYGCP07315 174 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 ERCC1P07992 297 aaPredicted RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 PRKACAP17612 351 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 SLC2A5P22732 501 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 TUBG1P23258 451 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 MSNP26038 577 aaKnown RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 CCR7P32248 378 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 SLC26A3P40879 764 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 CDKN2BP42772 138 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 TTPAP49638 278 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 CCR8P51685 355 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF140P52738 457 aaPredicted RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 HADHBP55084 474 aaKnown RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 OR4D2P58180 307 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 FAM53BQ14153 422 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 POU6F1Q14863 301 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 STK11Q15831 433 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 DEFB113Q30KQ7 82 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 RFX4Q33E94 735 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 SLC25A35Q3KQZ1 300 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 VPS26BQ4G0F5 336 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF658BQ4V348 819 aaPredicted RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 PLCXD3Q63HM9 321 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 CYB5R2Q6BCY4 276 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 NIPAL1Q6NVV3 410 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 TMEM205Q6UW68 189 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 LYPD2Q6UXB3 125 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 C19orf35Q6ZS72 473 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 NCCRP1Q6ZVX7 275 aaPredicted RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 PEX26Q7Z412 305 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 C6orf120Q7Z4R8 191 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 RPS19BP1Q86WX3 136 aaKnown RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 CRLF3Q8IUI8 442 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 MICU2Q8IYU8 434 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 GABRG1Q8N1C3 465 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 TBC1D19Q8N5T2 526 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 TMEM156Q8N614 296 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 OR51G1Q8NGK1 321 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 ACMSDQ8TDX5 336 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 GPX8Q8TED1 209 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 DNAJC1Q96KC8 554 aaKnown RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF285Q96NJ3 590 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 CYTH2Q99418 400 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 SIKE1Q9BRV8 207 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 UCK2Q9BZX2 261 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 RGCCQ9H4X1 137 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 ANKHQ9HCJ1 492 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 CTPS2Q9NRF8 586 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 CHRAC1Q9NRG0 131 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 TUBG2Q9NRH3 451 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 C20orf96Q9NUD7 363 aaPredicted RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 NLE1Q9NVX2 485 aaPredicted RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF226Q9NYT6 803 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 STOX2Q9P2F5 926 aaPredicted RBP2.62□□□□□ -1.99
PTCH1-216ENST00000548379 RELNP78509 3460 aa2.62□□□□□ -1.99
PTCH1-216ENST00000548379 NOTCH2Q04721 2471 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms