RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZNF561Q8N587 486 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 OR2T27Q8NH04 317 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 OR5R1Q8NH85 324 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 SSX3Q99909 188 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 PRRG3Q9BZD7 231 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 MEGF9Q9H1U4 602 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 PPA2Q9H2U2 334 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 MOB1AQ9H8S9 216 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 TCF7L1Q9HCS4 588 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 SIGLEC9Q9Y336 463 aa10.86□□□□□ -0.67
CPSF6-204ENST00000547486 M0QZ24 198 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 SLC1A7O00341 560 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 TIMM23O14925 209 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 TK1P04183 234 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 HTR1FP30939 366 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 ZNF273Q14593 569 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 UBE2V2Q15819 145 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 CRIP3Q6Q6R5 217 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 GID4Q8IVV7 300 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 YIPF7Q8N8F6 280 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 TRMT10AQ8TBZ6 339 aaKnown RBP10.85□□□□□ -0.67
CPSF6-204ENST00000547486 PIFOQ8TCI5 191 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 RNF166Q96A37 237 aaPredicted RBP10.85□□□□□ -0.67
CPSF6-204ENST00000547486 MMP27Q9H306 513 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 MTCH1Q9NZJ7 389 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 OR14J1Q9UGF5 321 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 WARS2Q9UGM6 360 aaKnown RBP10.85□□□□□ -0.67
CPSF6-204ENST00000547486 POLDIP2Q9Y2S7 368 aa10.85□□□□□ -0.67
CPSF6-204ENST00000547486 IGKV1-27A0A075B6S5 117 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 FAM230AA0A1W2PPH8 454 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 MEX3AA1L020 520 aaKnown RBP10.84□□□□□ -0.67
CPSF6-204ENST00000547486 ANKRD61A6NGH8 418 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 METTL15A6NJ78 407 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 DHRS7CA6NNS2 312 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 TSPAN15O95858 294 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 KRT8P05787 483 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 OR2T7P0C7T2 308 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 DLX6P56179 175 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 IL24Q13007 206 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 LY6EQ16553 131 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 C1orf146Q5VVC0 180 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 HIST2H2BDQ6DRA6 164 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 RDH10Q8IZV5 341 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 PRSS35Q8N3Z0 413 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 UBE2FQ969M7 185 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 EME1Q96AY2 570 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 HEXA-AS1Q9H8Q6 139 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 FBLN5Q9UBX5 448 aa10.84□□□□□ -0.67
CPSF6-204ENST00000547486 K7N7A8 449 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 SYT7O43581 403 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 INMTO95050 263 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 PIPP12273 146 aaPredicted RBP10.83□□□□□ -0.68
CPSF6-204ENST00000547486 COX7A1P24310 79 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 BMXP51813 675 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 COL10A1Q03692 680 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 ZNF85Q03923 595 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 DYNAPQ8N1N2 210 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 OR10H4Q8NGA5 316 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 OSBPL10Q9BXB5 764 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 GABARAPL3Q9BY60 117 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 PKIBQ9C010 78 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 RIBC2Q9H4K1 309 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 USE1Q9NZ43 259 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 OAZ3Q9UMX2 235 aa10.83□□□□□ -0.68
CPSF6-204ENST00000547486 FAM90A8PA6NJQ4 464 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 ZNF737O75373 536 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 SULT1C4O75897 302 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 GABRA5P31644 462 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 KIR3DL2P43630 455 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 ISL1P61371 349 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 LRRC75BQ2VPJ9 315 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 TP53I3Q53FA7 332 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 LDLRAD2Q5SZI1 272 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 ZNF782Q6ZMW2 699 aaPredicted RBP10.82□□□□□ -0.68
CPSF6-204ENST00000547486 LHFPL4Q7Z7J7 247 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 OR8J1Q8NGP2 316 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 SLAMF9Q96A28 289 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 CENPNQ96H22 339 aaPredicted RBP10.82□□□□□ -0.68
CPSF6-204ENST00000547486 FAM234AQ9H0X4 552 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 SLC7A11Q9UPY5 501 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 WNK1Q9H4A3 2382 aa10.82□□□□□ -0.68
CPSF6-204ENST00000547486 A0A1W2PPH5 198 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 TMEM82A0PJX8 343 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 SAC3D1A6NKF1 404 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 CHST1O43916 411 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 CHRM2P08172 466 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 FCGR1AP12314 374 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 ATP6V1E1P36543 226 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 KIR2DS4P43632 304 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 RASSF2P50749 326 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 RAB13P51153 203 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 FUT6P51993 359 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 EFNB2P52799 333 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 AANATQ16613 207 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 SLC25A26Q70HW3 274 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 ASCC1Q8N9N2 400 aaKnown RBP10.81□□□□□ -0.68
CPSF6-204ENST00000547486 FAM110DQ8TAY7 271 aaPredicted RBP10.81□□□□□ -0.68
CPSF6-204ENST00000547486 CEP19Q96LK0 163 aa10.81□□□□□ -0.68
CPSF6-204ENST00000547486 PLEKHA1Q9HB21 404 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms