RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 MRPS11P82912 194 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 MPPED2Q15777 294 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 WDR82Q6UXN9 313 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 C1QL2Q7Z5L3 287 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 MOGAT3Q86VF5 341 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 LRRC28Q86X40 367 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 C11orf53Q8IXP5 236 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 POC1AQ8NBT0 407 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 Q8NFD4 153 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 SLAMF9Q96A28 289 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 MARVELD3Q96A59 401 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 PHF21AQ96BD5 680 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 C1orf147Q96MC9 270 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 TMEM59Q9BXS4 323 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 CXorf56Q9H5V9 222 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 GCM1Q9NP62 436 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 RASL12Q9NYN1 266 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 MTCH1Q9NZJ7 389 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 RNF7Q9UBF6 113 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 DSCAMO60469 2012 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 IGKV1-12A0A0C4DH73 117 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 IGHV3-64DA0A0J9YX35 117 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 LDLRAD4O15165 306 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 CDC14BO60729 498 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 RHBDL1O75783 438 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 IGKV1D-12P01611 117 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 MGMTP16455 207 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 TALDO1P37837 337 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 QRFPP83859 136 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A1Q86YD7 464 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 ZCCHC24Q8N2G6 241 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 OSR2Q8N2R0 312 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 S100A16Q96FQ6 103 aaKnown RBP13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 CCL19Q99731 98 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 NRIP2Q9BQI9 281 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 ABCG5Q9H222 651 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 DLL4Q9NR61 685 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 RHBDL2Q9NX52 303 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 NPTNQ9Y639 398 aa13.38□□□□□ -0.27
TRAFD1-203ENST00000547063 A0A0A6YYH2 397 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 IGHV1-69-2A0A0G2JMI3 117 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 A6NJ64 397 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM25AB3EWG3 89 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM25CB3EWG5 89 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM25GB3EWG6 89 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 OVOL3O00110 214 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 CTDSP2O14595 271 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 AKR7A2O43488 359 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 NXPH2O95156 264 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 MPIG6BO95866 241 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 BCL3P20749 454 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 CPT2P23786 658 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 FGF12P61328 243 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 ERVK11-1P61568 191 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 HFEQ30201 348 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 SMIM21Q3B7S5 101 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 NHLRC3Q5JS37 347 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 RAB12Q6IQ22 244 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 ZNF826PQ6ZT77 177 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 LINC00596Q86U02 117 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM58AQ8N1B3 248 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 OR6Q1Q8NGQ2 317 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 OR5H6Q8NGV6 325 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 OR10K1Q8NGX5 313 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 LRRC29Q8WV35 223 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM46BQ96A09 425 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 WDFY2Q96P53 400 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 DIABLOQ9NR28 239 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 RABL2AQ9UBK7 228 aaPredicted RBP13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 GLS2Q9UI32 602 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 RABL2BQ9UNT1 228 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 CHD3Q12873 2000 aaKnown RBP13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 TENM4Q6N022 2769 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 CACNA1DQ01668 2161 aa13.37□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A10PA6NDY2 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A18PA6NE21 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A16PA6NEW6 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A20PA6NIJ5 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A8PA6NJQ4 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A7PA6NKC0 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A22PA8MWA6 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A12PA8MX19 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A5PA8MXJ8 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A23PA8MXZ1 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 SRRM5B3KS81 715 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 HPGDSO60760 199 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 SFTPBP07988 381 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 CHRM2P08172 466 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A15PP0C7V4 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A13PP0C7W8 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A14PP0C7W9 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 FAM90A24PP0C7X0 464 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 GLRA1P23415 457 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 RPS27AP62979 156 aaKnown RBP13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 UNC119Q13432 240 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 SPIN3Q5JUX0 258 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 TMEM104Q8NE00 496 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 OR56B1Q8NGI3 324 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 OR51T1Q8NGJ9 327 aa13.36□□□□□ -0.27
TRAFD1-203ENST00000547063 RDH5Q92781 318 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms