RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 RPS2P15880 293 aaKnown RBP11.52□□□□□ -0.57
PTCH1-213ENST00000546820 EGR1P18146 543 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 RANBP1P43487 201 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 FABP5Q01469 135 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 SSX1Q16384 188 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 ASPHD2Q6ICH7 369 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 ACP7Q6ZNF0 438 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 TMEM91Q6ZNR0 172 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 SLC36A1Q7Z2H8 476 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 NKAIN3Q8N8D7 197 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 LINC01356Q8N9X3 169 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 SLAMF9Q96A28 289 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 RFT1Q96AA3 541 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 FOXRED1Q96CU9 486 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-213ENST00000546820 ORAI1Q96D31 301 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 MED30Q96HR3 178 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 NRIP2Q9BQI9 281 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 WDR13Q9H1Z4 485 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 SNTG1Q9NSN8 517 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 MTCH1Q9NZJ7 389 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 GLS2Q9UI32 602 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 SSR3Q9UNL2 185 aa11.52□□□□□ -0.57
PTCH1-213ENST00000546820 TRDV1A0A1B0GX56 115 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 MAGEA13PA6NCF6 341 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 ADAM20O43506 726 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 SPRY1O43609 319 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-213ENST00000546820 FOXH1O75593 365 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 IGHV4-31P0DP07 118 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 JUNBP17275 347 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-213ENST00000546820 PTGFRP43088 359 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 NPY4RP50391 375 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 PSMD7P51665 324 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 BMXP51813 675 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 ERVK11-1P61568 191 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 INSL4Q14641 139 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 ESCO2Q56NI9 601 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 ATPAF1Q5TC12 328 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-213ENST00000546820 GLT8D1Q68CQ7 371 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 JAGN1Q8N5M9 183 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 PXT1Q8NFP0 134 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 OR5T2Q8NGG2 359 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 OR5D18Q8NGL1 313 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 TNFAIP8L1Q8WVP5 186 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 MUL1Q969V5 352 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 C1orf159Q96HA4 380 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 ZNF488Q96MN9 340 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 ELL3Q9HB65 397 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-213ENST00000546820 SMURF1Q9HCE7 757 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 KAAG1Q9UBP8 84 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 GSTK1Q9Y2Q3 226 aa11.51□□□□□ -0.57
PTCH1-213ENST00000546820 NKX6-3A6NJ46 265 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 TRIM64CA6NLI5 447 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-213ENST00000546820 TNFRSF13BO14836 293 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-213ENST00000546820 TMPRSS2O15393 492 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 ANGPTL7O43827 346 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 KNG1P01042 644 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 TGFAP01135 160 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 PSG2P11465 335 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 CALRP27797 417 aaKnown RBP11.5□□□□□ -0.57
PTCH1-213ENST00000546820 IL2RGP31785 369 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 GABRA2P47869 451 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 GNB2P62879 340 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 HOXA4Q00056 320 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-213ENST00000546820 GPR176Q14439 515 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 RSU1Q15404 277 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 FAM27D1Q5T7N8 215 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 CD200R1LQ6Q8B3 271 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 LYPD2Q6UXB3 125 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 CLEC9AQ6UXN8 241 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 FAM58AQ8N1B3 248 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 EMG1Q92979 244 aaKnown RBP11.5□□□□□ -0.57
PTCH1-213ENST00000546820 SEH1LQ96EE3 360 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 CCL13Q99616 98 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 UQCC2Q9BRT2 126 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 FAM192AQ9GZU8 254 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 METTL9Q9H1A3 318 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 HES4Q9HCC6 221 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 EXOSC4Q9NPD3 245 aaKnown RBP11.5□□□□□ -0.57
PTCH1-213ENST00000546820 CLN8Q9UBY8 286 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 STUB1Q9UNE7 303 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 ING4Q9UNL4 249 aa11.5□□□□□ -0.57
PTCH1-213ENST00000546820 RFPL4AA6NLU0 287 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 FAM157AC9JC47 383 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 F5H0A9 414 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-213ENST00000546820 RFPL4AL1F8VTS6 287 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 PDCD5O14737 125 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 NDUFB3O43676 98 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 CD5LO43866 347 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 ZNF780AO75290 641 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-213ENST00000546820 KDM4BO94953 1096 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 CSTBP04080 98 aaKnown RBP11.49□□□□□ -0.57
PTCH1-213ENST00000546820 MSMBP08118 114 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 CD36P16671 472 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 BCL3P20749 454 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 MYL9P24844 172 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 FGF9P31371 208 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-213ENST00000546820 PRDX2P32119 198 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 PITPNBP48739 271 aa11.49□□□□□ -0.57
PTCH1-213ENST00000546820 GP2P55259 537 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms