RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 IGFBP6P24592 240 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-212ENST00000546744 MMP16P51512 607 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF121P58317 390 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-212ENST00000546744 KTI12Q96EK9 354 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-212ENST00000546744 CFHR5Q9BXR6 569 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 WDR61Q9GZS3 305 aaKnown RBP11.43□□□□□ -0.58
PTCH1-212ENST00000546744 MRPL22Q9NWU5 206 aaKnown RBP11.43□□□□□ -0.58
PTCH1-212ENST00000546744 SCN1AP35498 2009 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 CTSVO60911 334 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 SSR4P51571 173 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF141Q15928 474 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 C19orf48Q6RUI8 117 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 C12orf54Q6X4T0 127 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 RTN4RL1Q86UN2 441 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-212ENST00000546744 OR8G5Q8NG78 346 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 ARHGAP5-AS1Q96IT6 56 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 TMEM167BQ9NRX6 74 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 WDR81Q562E7 1941 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 CDC14CA4D256 554 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 PDCD6O75340 191 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 AKR7A3O95154 331 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 GLRA1P23415 457 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 GPM6AP51674 278 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 KISS1Q15726 138 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 FAM78BQ5VT40 261 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 IL23AQ9NPF7 189 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 NPDC1Q9NQX5 325 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-212ENST00000546744 TMEM30AQ9NV96 361 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 UQCR10Q9UDW1 63 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 AMDHD2Q9Y303 409 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 A0A1W2PNV4 684 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 ST8SIA5O15466 376 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 EPPINO95925 133 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 HEXAP06865 529 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 IAPPP10997 89 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 CARD18P57730 90 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 ERHP84090 104 aaKnown RBP11.42□□□□□ -0.58
PTCH1-212ENST00000546744 IFI44Q8TCB0 444 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 NDFIP1Q9BT67 221 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 UBE2L5PA0A1B0GUS4 154 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 AQP7O14520 342 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 CDC14BO60729 498 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF253O75346 499 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 DHRS3O75911 302 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 ZIC2O95409 532 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-212ENST00000546744 CD8AP01732 235 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 GDF1P27539 372 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 ARR3P36575 388 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 SUCLG1P53597 346 aaKnown RBP11.42□□□□□ -0.58
PTCH1-212ENST00000546744 PMP22Q01453 160 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 EXT1Q16394 746 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF385CQ66K41 422 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-212ENST00000546744 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-212ENST00000546744 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTCH1-212ENST00000546744 OR4D9Q8NGE8 314 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 POM121Q96HA1 1249 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 TMEM265A0A087WTH1 108 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 KIAA1324LA8MWY0 1029 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-212ENST00000546744 DHHO43323 396 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 KCNAB3O43448 404 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 GLI4P10075 376 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 MDH2P40926 338 aaKnown RBP11.42□□□□□ -0.58
PTCH1-212ENST00000546744 LBX1P52954 281 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 C21orf62-AS1Q17RA5 79 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 WFDC5Q8TCV5 224 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 ANXA10Q9UJ72 324 aa11.42□□□□□ -0.58
PTCH1-212ENST00000546744 TTRP02766 147 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 FSTP19883 344 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 CDKN2AP42771 156 aaKnown RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 GPR12P47775 334 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 GNG4P50150 75 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 MRPL43Q8N983 215 aaKnown RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 DDA1Q9BW61 102 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 TLNRD1Q9H1K6 362 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 MRM2Q9UI43 246 aaKnown RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 A0A1B0GX78 115 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF891A8MT65 544 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 H0Y8G0 127 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 PITX3O75364 302 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 OR2J2O76002 312 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 CD1CP29017 333 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF117Q03924 483 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 ERV3-1Q14264 604 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 LEMD1Q68G75 181 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 THSD4Q6ZMP0 1018 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 ADAMTS17Q8TE56 1095 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 HIST1H2BAQ96A08 127 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 COL25A1Q9BXS0 654 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 GSN-AS1Q9NRJ2 163 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 C20orf141Q9NUB4 165 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 PPP1R14DQ9NXH3 145 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 DNAJB12Q9NXW2 375 aaKnown RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 ST6GALNAC2Q9UJ37 374 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 ZDHHC8Q9ULC8 765 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 PIAS3Q9Y6X2 628 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 FAM24AA6NFZ4 105 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 SEMA7AO75326 666 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 BRS3P32247 399 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms