RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 UTP23Q9BRU9 249 aaKnown RBP12.87□□□□□ -0.35
HOXC11-202ENST00000546378 ALX4Q9H161 411 aaPredicted RBP12.87□□□□□ -0.35
HOXC11-202ENST00000546378 P4HTMQ9NXG6 502 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 ZMAT5Q9UDW3 170 aaKnown RBP12.87□□□□□ -0.35
HOXC11-202ENST00000546378 TECTAO75443 2155 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 PIAS2O75928 621 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 HKR1P10072 659 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 SLC25A4P12235 298 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 FABP4P15090 132 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 UBE2KP61086 200 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 PPA1Q15181 289 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 TEX30Q5JUR7 227 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 UBALD2Q8IYN6 164 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 CADM4Q8NFZ8 388 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 OR2G3Q8NGZ4 309 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 RTN4IP1Q8WWV3 396 aaPredicted RBP12.87□□□□□ -0.35
HOXC11-202ENST00000546378 ALKBH3Q96Q83 286 aaPredicted RBP12.87□□□□□ -0.35
HOXC11-202ENST00000546378 PRRX2Q99811 253 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 SEC11CQ9BY50 192 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 SLCO5A1Q9H2Y9 848 aa12.87□□□□□ -0.35
HOXC11-202ENST00000546378 ATMQ13315 3056 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 ACKR3P25106 362 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF345Q14585 488 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.86□□□□□ -0.35
HOXC11-202ENST00000546378 HLA-BQ31612 363 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 HOGA1Q86XE5 327 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 OR51H1Q8NH63 302 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF519Q8TB69 540 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 TCTEX1D2Q8WW35 142 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 TMPRSS5Q9H3S3 457 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 GPR132Q9UNW8 380 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 LMO7DNF2Z398 122 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 HSD17B6O14756 317 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 SLC6A8P48029 635 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 SRYQ05066 204 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 EMC4Q5J8M3 183 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 DTX1Q86Y01 620 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 HOXB13Q92826 284 aaPredicted RBP12.86□□□□□ -0.35
HOXC11-202ENST00000546378 ZDHHC12Q96GR4 267 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 SLC26A1Q9H2B4 701 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 UBE2J1Q9Y385 318 aaPredicted RBP12.86□□□□□ -0.35
HOXC11-202ENST00000546378 LHFPL6Q9Y693 200 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 CADP27708 2225 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 TRAPPC6AO75865 159 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 RAB5AP20339 215 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 DHRS7BQ6IAN0 325 aaPredicted RBP12.86□□□□□ -0.35
HOXC11-202ENST00000546378 SLC25A45Q8N413 288 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF383Q8NA42 475 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 HPSE2Q8WWQ2 592 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
HOXC11-202ENST00000546378 A0A0U1RQK1 487 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF724A8MTY0 619 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 PET100P0DJ07 73 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 GLP1RP43220 463 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 DAP3P51398 398 aaKnown RBP12.85□□□□□ -0.35
HOXC11-202ENST00000546378 RNF4P78317 190 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 MRPS34P82930 218 aaKnown RBP12.85□□□□□ -0.35
HOXC11-202ENST00000546378 TMEM268Q5VZI3 342 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 EIF4E3Q8N5X7 224 aaKnown RBP12.85□□□□□ -0.35
HOXC11-202ENST00000546378 NKAIN3Q8N8D7 197 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 TMEM234Q8WY98 164 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 SLC5A7Q9GZV3 580 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 IGKV1-9A0A0C4DH69 117 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 CLPSP04118 112 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 KLK3P07288 261 aaPredicted RBP12.85□□□□□ -0.35
HOXC11-202ENST00000546378 GABRA4P48169 554 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 OR2B11Q5JQS5 317 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 FAM166AQ6J272 317 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 LINC00469Q8N7U9 141 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 ASB10Q8WXI3 467 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 ADIPOR1Q96A54 375 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 SGCZQ96LD1 299 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 ADAM19Q9H013 955 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 FAM206AQ9NX38 181 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 GNG13Q9P2W3 67 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 KCNIP3Q9Y2W7 256 aa12.85□□□□□ -0.35
HOXC11-202ENST00000546378 TGIF2-C20orf24A0A0A6YYL0 155 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 A0A1B0GV90 55 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 GEMIN2O14893 280 aaKnown RBP12.84□□□□□ -0.35
HOXC11-202ENST00000546378 TAS2R31P59538 309 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 RAB11AP62491 216 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 VAMP2P63027 116 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 ZDHHC22Q8N966 263 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 SLC38A9Q8NBW4 561 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 SLC30A7Q8NEW0 376 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 RPS4Y2Q8TD47 263 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 PHYHIPLQ96FC7 376 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 FAM212BQ9NTI7 297 aaPredicted RBP12.84□□□□□ -0.35
HOXC11-202ENST00000546378 PLA2G3Q9NZ20 509 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 THADAQ6YHU6 1953 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 CFAP47Q6ZTR5 3102 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 IGHG1P01857 330 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 MBPP02686 304 aaPredicted RBP12.84□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF728P0DKX0 622 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 ELLP55199 621 aaPredicted RBP12.84□□□□□ -0.35
HOXC11-202ENST00000546378 TESK1Q15569 626 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 TSC22D1Q15714 1073 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 UBE2V2Q15819 145 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 ZNF880Q6PDB4 577 aa12.84□□□□□ -0.35
HOXC11-202ENST00000546378 UQCC3Q6UW78 93 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms