RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 TFAP2EQ6VUC0 442 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 TIPARPQ7Z3E1 657 aaKnown RBP13.59□□□□□ -0.23
SCAP-215ENST00000545718 OR2V1Q8NHB1 315 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 LHFPL5Q8TAF8 219 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 CT55Q8WUE5 264 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 FAM117AQ9C073 453 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 PIGMQ9H3S5 423 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 GLS2Q9UI32 602 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 ZNF716A6NP11 495 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 GPR31O00270 319 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 AGPAT2O15120 278 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 CCL2P13500 99 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 RPS2P15880 293 aaKnown RBP13.59□□□□□ -0.23
SCAP-215ENST00000545718 ZNF133P52736 654 aaPredicted RBP13.59□□□□□ -0.23
SCAP-215ENST00000545718 ARL6IP1Q15041 203 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 PLEKHN1Q494U1 663 aaPredicted RBP13.59□□□□□ -0.23
SCAP-215ENST00000545718 ABCA11PQ4W5N1 156 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 CLEC9AQ6UXN8 241 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 TMEM105Q8N8V8 129 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 FNDC9Q8TBE3 224 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 SPSB1Q96BD6 273 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 SF3B5Q9BWJ5 86 aaKnown RBP13.59□□□□□ -0.23
SCAP-215ENST00000545718 DNTTIP1Q9H147 329 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 C1orf123Q9NWV4 160 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 P4HTMQ9NXG6 502 aa13.59□□□□□ -0.23
SCAP-215ENST00000545718 DOCK10Q96BY6 2186 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 CEACAM18A8MTB9 384 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 RCC1P18754 421 aaPredicted RBP13.58□□□□□ -0.24
SCAP-215ENST00000545718 PIGPP57054 158 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 ZNF169Q14929 603 aaPredicted RBP13.58□□□□□ -0.24
SCAP-215ENST00000545718 RPL7L1Q6DKI1 246 aaKnown RBP13.58□□□□□ -0.24
SCAP-215ENST00000545718 SLC23A3Q6PIS1 610 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 SKA3Q8IX90 412 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 RNF141Q8WVD5 230 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 CPNE2Q96FN4 548 aaPredicted RBP13.58□□□□□ -0.24
SCAP-215ENST00000545718 ST3GAL6Q9Y274 331 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 MEMO1Q9Y316 297 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 LRRC3CA6NJW4 275 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 CDK2AP1O14519 115 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 SRSF3P84103 164 aaKnown RBP13.58□□□□□ -0.24
SCAP-215ENST00000545718 RBM39Q14498 530 aaKnown RBP13.58□□□□□ -0.24
SCAP-215ENST00000545718 OR2A2Q6IF42 318 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 TMEM88Q6PEY1 159 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 THOC3Q96J01 351 aaKnown RBP13.58□□□□□ -0.24
SCAP-215ENST00000545718 LIME1Q9H400 295 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 CYTL1Q9NRR1 136 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 LRFN1Q9P244 771 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 TIMM10BQ9Y5J6 103 aa13.58□□□□□ -0.24
SCAP-215ENST00000545718 NCKAP5O14513 1909 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 OR7C1O76099 320 aaPredicted RBP13.57□□□□□ -0.24
SCAP-215ENST00000545718 ACTL6AO96019 429 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 CST2P09228 141 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 JMJD7P0C870 316 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 PET100P0DJ07 73 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 NME2P22392 152 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 SLC22A25Q6T423 547 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 POC1AQ8NBT0 407 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 OR5T2Q8NGG2 359 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 CPT1CQ8TCG5 803 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 KCNE4Q8WWG9 221 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 MRPL24Q96A35 216 aaKnown RBP13.57□□□□□ -0.24
SCAP-215ENST00000545718 OR2H1Q9GZK4 316 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 PARP12Q9H0J9 701 aaKnown RBP13.57□□□□□ -0.24
SCAP-215ENST00000545718 ZNF442Q9H7R0 627 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 SLC7A11Q9UPY5 501 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 IGKV1-12A0A0C4DH73 117 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 ATP6V1G2-DDX39BF2Z307 99 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 F12P00748 615 aaPredicted RBP13.57□□□□□ -0.24
SCAP-215ENST00000545718 IFNA21P01568 189 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 IGKV1D-12P01611 117 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 ICAM2P13598 275 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 SMCO1Q147U7 214 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 CDCP2Q5VXM1 449 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 C6orf15Q6UXA7 325 aaPredicted RBP13.57□□□□□ -0.24
SCAP-215ENST00000545718 OR10AD1Q8NGE0 317 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 ARL11Q969Q4 196 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 NKX6-2Q9C056 277 aaPredicted RBP13.57□□□□□ -0.24
SCAP-215ENST00000545718 WNT5BQ9H1J7 359 aa13.57□□□□□ -0.24
SCAP-215ENST00000545718 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.57□□□□□ -0.24
SCAP-215ENST00000545718 TRBV6-7A0A0A0MS04 114 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 F8W036 122 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 ABCD4O14678 606 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 MSTNO14793 375 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 BLOC1S1P78537 153 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 PABPC1L2AQ5JQF8 200 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 OR5L1Q8NGL2 311 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 C10orf35Q96D05 121 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 HES7Q9BYE0 225 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 FAM166BA8MTA8 275 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 LRP3O75074 770 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 FARS2O95363 451 aaKnown RBP13.56□□□□□ -0.24
SCAP-215ENST00000545718 HOXA6P31267 233 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 RAB11FIP2Q7L804 512 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 C1orf210Q8IVY1 113 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 OSR2Q8N2R0 312 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 SLC30A7Q8NEW0 376 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 MARS2Q96GW9 593 aaKnown RBP13.56□□□□□ -0.24
SCAP-215ENST00000545718 CALHM2Q9HA72 323 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 GPR35Q9HC97 309 aa13.56□□□□□ -0.24
SCAP-215ENST00000545718 NOSIPQ9Y314 301 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms