RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 KCNJ3P48549 501 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 SULT1A2P50226 295 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 HIST1H3AP68431 136 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 SURF2Q15527 256 aaPredicted RBP13.75□□□□□ -0.21
LDLR-204ENST00000545707 HIST2H3PS2Q5TEC6 136 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 DHRS11Q6UWP2 260 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 BTNL8Q6UX41 500 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 HIST2H3AQ71DI3 136 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 LYZL2Q7Z4W2 148 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 SPTSSAQ969W0 71 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 AKR1E2Q96JD6 320 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 FOXD3Q9UJU5 478 aaPredicted RBP13.75□□□□□ -0.21
LDLR-204ENST00000545707 NUDT19A8MXV4 375 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 GEMIN2O14893 280 aaKnown RBP13.75□□□□□ -0.21
LDLR-204ENST00000545707 LCATP04180 440 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 FCGR3AP08637 254 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 OR5AC1P0C628 307 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 CXCL12P48061 93 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 FHITP49789 147 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 RAB13P51153 203 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 ZNF528Q3MIS6 628 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 YRDCQ86U90 279 aaKnown RBP13.75□□□□□ -0.21
LDLR-204ENST00000545707 TDHQ8IZJ6 230 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 MAML2Q8IZL2 1156 aaPredicted RBP13.75□□□□□ -0.21
LDLR-204ENST00000545707 MR1Q95460 341 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 CRLF2Q9HC73 371 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 ZFP57Q9NU63 452 aa13.75□□□□□ -0.21
LDLR-204ENST00000545707 FRYQ5TBA9 3013 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 IGHV1-45A0A0A0MS14 117 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 SGCEO43556 437 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 IFNA21P01568 189 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 MBPP02686 304 aaPredicted RBP13.74□□□□□ -0.21
LDLR-204ENST00000545707 B4GALT1P15291 398 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 RFC3P40938 356 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 STARD6P59095 220 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 SMCO1Q147U7 214 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 C5orf24Q7Z6I8 188 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 TMEM156Q8N614 296 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 OR11L1Q8NGX0 322 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 SECTM1Q8WVN6 248 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 ALKBH3Q96Q83 286 aaPredicted RBP13.74□□□□□ -0.21
LDLR-204ENST00000545707 METTL9Q9H1A3 318 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 CCDC187A0A096LP49 1063 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 IGKV1-12A0A0C4DH73 117 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 A0A0G2JMM0 328 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 A0A1W2PPB8 328 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 A0A1W2PRS3 328 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 KIR3DP1A8MWS1 328 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 TAAR5O14804 337 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 EIF1BO60739 113 aaKnown RBP13.74□□□□□ -0.21
LDLR-204ENST00000545707 IGKV1D-12P01611 117 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 CCL4P13236 92 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 FOXL2NBQ6ZUU3 175 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 OR5L1Q8NGL2 311 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 SAP25Q8TEE9 199 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 ANGPTL4Q9BY76 406 aa13.74□□□□□ -0.21
LDLR-204ENST00000545707 COL6A3P12111 3177 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 SHANK1Q9Y566 2161 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 RRP8O43159 456 aaKnown RBP13.73□□□□□ -0.21
LDLR-204ENST00000545707 CD5P06127 495 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 ZNF728P0DKX0 622 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 COX6A1P12074 109 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 NR2C1P13056 603 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 DSCR4P56555 118 aaPredicted RBP13.73□□□□□ -0.21
LDLR-204ENST00000545707 FAM76BQ5HYJ3 339 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 EIF5AL1Q6IS14 154 aaKnown RBP13.73□□□□□ -0.21
LDLR-204ENST00000545707 OPN5Q6U736 354 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 PLXDC2Q6UX71 529 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 FGFBP3Q8TAT2 258 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 RTN4IP1Q8WWV3 396 aaPredicted RBP13.73□□□□□ -0.21
LDLR-204ENST00000545707 IMMP1LQ96LU5 166 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 WFDC1Q9HC57 220 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 TUBD1Q9UJT1 453 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 HS3ST3B1Q9Y662 390 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 NME2P1O60361 137 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 C1QL1O75973 258 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 CRYGSP22914 178 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 FKBP2P26885 142 aaKnown RBP13.73□□□□□ -0.21
LDLR-204ENST00000545707 ASCL1P50553 236 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 PPT1P50897 306 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 ZNF133P52736 654 aaPredicted RBP13.73□□□□□ -0.21
LDLR-204ENST00000545707 HLA-BQ31612 363 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 FAM27BQ5VT28 67 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 SHEQ5VZ18 495 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 NSUN5P2Q63ZY6 315 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 SLC22A25Q6T423 547 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 FBXL14Q8N1E6 418 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 OR10AD1Q8NGE0 317 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 KIRREL1Q96J84 757 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 NAA11Q9BSU3 229 aaPredicted RBP13.73□□□□□ -0.21
LDLR-204ENST00000545707 DUSP23Q9BVJ7 150 aa13.73□□□□□ -0.21
LDLR-204ENST00000545707 KLF2Q9Y5W3 355 aaPredicted RBP13.73□□□□□ -0.21
LDLR-204ENST00000545707 A0A087WZY1 265 aa13.72□□□□□ -0.21
LDLR-204ENST00000545707 A0A1B0GV50 99 aa13.72□□□□□ -0.21
LDLR-204ENST00000545707 ZNF98A6NK75 572 aa13.72□□□□□ -0.21
LDLR-204ENST00000545707 SYNGR3O43761 229 aa13.72□□□□□ -0.21
LDLR-204ENST00000545707 KLF7O75840 302 aaPredicted RBP13.72□□□□□ -0.21
LDLR-204ENST00000545707 VAMP5O95183 116 aa13.72□□□□□ -0.21
LDLR-204ENST00000545707 ONECUT2O95948 504 aa13.72□□□□□ -0.21
LDLR-204ENST00000545707 ZNF32P17041 273 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms