RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	RNF13	O43567	381 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	TIMM8A	O60220	97 aa	Predicted RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	IGHG1	P01857	330 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	C1QC	P02747	245 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	MELTF	P08582	738 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	MMP7	P09237	267 aa	Predicted RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	THRB	P10828	461 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	RPS2	P15880	293 aa	Known RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	GSTM3	P21266	225 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	ACKR3	P25106	362 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	TGFBR2	P37173	567 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	MPV17	P39210	176 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	CDKN2C	P42773	168 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	GUCA1A	P43080	201 aa	Predicted RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	RPL14	P50914	215 aa	Known RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	HMGA2	P52926	109 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	PPP1CB	P62140	327 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	HOXC5	Q00444	222 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	BST1	Q10588	318 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	PSG7	Q13046	419 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	GPR50	Q13585	617 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZMYND11	Q15326	602 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	OR1Q1	Q15612	314 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	HIST3H3	Q16695	136 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	HSP90B2P	Q58FF3	399 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	RUSC1-AS1	Q66K80	236 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF774	Q6NX45	483 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	BRD3OS	Q6XYD6	125 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	LRRC18	Q8N456	261 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	TCEANC	Q8N8B7	351 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	DMBX1	Q8NFW5	382 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	OR8B3	Q8NGG8	313 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	OR13A1	Q8NGR1	328 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	GEMIN6	Q8WXD5	167 aa	Known RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	PHYHIP	Q92561	330 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	HIST1H2AC	Q93077	130 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	MCHR2	Q969V1	340 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	MRPL53	Q96EL3	112 aa	Known RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	NEDD4L	Q96PU5	975 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	OR8B2	Q96RD0	313 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	S1PR3	Q99500	378 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZBTB18	Q99592	522 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	WAC	Q9BTA9	647 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	TMEM43	Q9BTV4	400 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	RMND5A	Q9H871	391 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	MED4	Q9NPJ6	270 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	TAS2R5	Q9NYW4	299 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF319	Q9P2F9	582 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	STX18	Q9P2W9	335 aa	Known RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	ERVK-18	Q9QC07	812 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	ELF5	Q9UKW6	265 aa	Predicted RBP	4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585	TIMM10B	Q9Y5J6	103 aa		4.94	□□□□□ -1.62
CPSF7-222	ENST00000544585		A0A0B4J2E0	115 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585		A0A1B0GX12	115 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	LRRC30	A6NM36	301 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	C5orf58	C9J3I9	102 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	ENSA	O43768	121 aa	Known RBP	4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	KRT8	P05787	483 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	BPGM	P07738	259 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	PGA4	P0DJD7	388 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	PGA3	P0DJD8	388 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	RRAS	P10301	218 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	NR2C1	P13056	603 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF32	P17041	273 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF133	P52736	654 aa	Predicted RBP	4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	FGF12	P61328	243 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	PCBD1	P61457	104 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	NCALD	P61601	193 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	PRKDC	P78527	4128 aa	Known RBP	4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	PSG4	Q00888	419 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	EMX1	Q04741	257 aa	Predicted RBP	4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	RGN	Q15493	299 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF181	Q2M3W8	571 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	SPRN	Q5BIV9	151 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	SPATA46	Q5T0L3	261 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	FAM27B	Q5VT28	67 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	TTC33	Q6PID6	262 aa	Predicted RBP	4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	DHRS4L2	Q6PKH6	230 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	HDDC2	Q7Z4H3	204 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	EGFL6	Q8IUX8	553 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	NUDCD3	Q8IVD9	361 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF101	Q8IZC7	436 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	SPERT	Q8NA61	448 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	CCDC197	Q8NCU1	140 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	OR2Z1	Q8NG97	314 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	TCP10L	Q8TDR4	215 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	NPRL2	Q8WTW4	380 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	HAVCR1	Q96D42	359 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	TEX37	Q96LM6	180 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	PPP1R36	Q96LQ0	422 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	ZNF607	Q96SK3	696 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	KRTAP4-12	Q9BQ66	201 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	TMEM246	Q9BRR3	403 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	MRPL13	Q9BYD1	178 aa	Known RBP	4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	NANS	Q9NR45	359 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	NECAP2	Q9NVZ3	263 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	DCAF16	Q9NXF7	216 aa		4.93	□□□□□ -1.62
CPSF7-222	ENST00000544585	SLC17A7	Q9P2U7	560 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms