RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, human

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMTD1-208	ENST00000544451	IGLV3-21	P80748	117 aa	Predicted RBP	11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	DMWD	Q09019	674 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	LCN15	Q6UWW0	184 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	MCEMP1	Q8IX19	187 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	RDH5	Q92781	318 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	MVB12A	Q96EY5	273 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	HMGB3	O15347	200 aa	Known RBP	11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	DHH	O43323	396 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	IFNA17	P01571	189 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	FABP1	P07148	127 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	FST	P19883	344 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	RBP2	P50120	134 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ECH1	Q13011	328 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	OR4A4P	Q8NGN8	299 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SCGB1C1	Q8TD33	95 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	LIPH	Q8WWY8	451 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	UTP23	Q9BRU9	249 aa	Known RBP	11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SH3BGRL3	Q9H299	93 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	P4HTM	Q9NXG6	502 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	AK3	Q9UIJ7	227 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	KIAA1549L	Q6ZVL6	1849 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SERPINE2	P07093	398 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ADCYAP1	P18509	176 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	S100P	P25815	95 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	PTGER4	P35408	488 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SMAD4	Q13485	552 aa	Known RBP	11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	IL34	Q6ZMJ4	242 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	WDFY1	Q8IWB7	410 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	OR6S1	Q8NH40	331 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ERGIC1	Q969X5	290 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	MRGPRX4	Q96LA9	322 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SLC26A1	Q9H2B4	701 aa		11.63	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SPTA1	P02549	2419 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451		A0A1B0GTI1	187 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ZNF727	A8MUV8	499 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ZNF814	B7Z6K7	855 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	CXCL13	O43927	109 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451		P04436	131 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	NKX2-1	P43699	371 aa	Predicted RBP	11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	RAB11A	P62491	216 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	C9orf152	Q5JTZ5	239 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	OPN5	Q6U736	354 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ARHGEF39	Q8N4T4	335 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ASB13	Q8WXK3	278 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	CPNE4	Q96A23	557 aa	Predicted RBP	11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	GNG13	Q9P2W3	67 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	TICRR	Q7Z2Z1	1910 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451		A0A0A6YYD4	124 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	NRAS	P01111	189 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	GLB1	P16278	677 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	IGFBP3	P17936	291 aa	Predicted RBP	11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	LGI3	Q8N145	548 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	CCDC71L	Q8N9Z2	235 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	NECAP1	Q8NC96	275 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SEC11C	Q9BY50	192 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	C19orf12	Q9NSK7	152 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	TRAV39	A0A0B4J263	110 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	LY86	O95711	162 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	IFNA5	P01569	189 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	TK1	P04183	234 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	MDK	P21741	143 aa	Predicted RBP	11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	DVL1P1	P54792	670 aa	Predicted RBP	11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	RPL23A	P62750	156 aa	Known RBP	11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	OR2B11	Q5JQS5	317 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SHE	Q5VZ18	495 aa		11.62	□□□□□ -0.55
PCMTD1-208	ENST00000544451	GDF1	P27539	372 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ELL	P55199	621 aa	Predicted RBP	11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ARL6IP1	Q15041	203 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SHB	Q15464	509 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	TESK1	Q15569	626 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	UBE2V2	Q15819	145 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	FDX2	Q6P4F2	183 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	LILRB2	Q8N423	598 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	WDSUB1	Q8N9V3	476 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	PLPP5	Q8NEB5	264 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	OR10S1	Q8NGN2	331 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	RFNG	Q9Y644	331 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	IGKV1D-8	A0A087WSZ0	117 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	NSG1	A0A0A6YYJ2	146 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451		E5RGE8	158 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	CLPS	P04118	112 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	H2AFB1	P0C5Y9	115 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	CNN3	Q15417	329 aa	Known RBP	11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	SPACA9	Q96E40	222 aa	Predicted RBP	11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	TGIF2	Q9GZN2	237 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	ZNF576	Q9H609	170 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	CALHM2	Q9HA72	323 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	MCTS1	Q9ULC4	181 aa	Known RBP	11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	NSG2	Q9Y328	171 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451		A0A0U1RQK1	487 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	MSTN	O14793	375 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	YIF1A	O95070	293 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	CARD18	P57730	90 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	NKX6-1	P78426	367 aa	Predicted RBP	11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	MRPL21	Q7Z2W9	205 aa	Known RBP	11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	OR5AS1	Q8N127	324 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	RASL10B	Q96S79	203 aa		11.61	□□□□□ -0.55
PCMTD1-208	ENST00000544451	MOB1A	Q9H8S9	216 aa		11.61	□□□□□ -0.55

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