RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CDH20Q9HBT6 801 aa11.73□□□□□ -0.53
HCFC2-202ENST00000544223 MTCH1Q9NZJ7 389 aa11.73□□□□□ -0.53
HCFC2-202ENST00000544223 NPAP1Q9NZP6 1156 aa11.73□□□□□ -0.53
HCFC2-202ENST00000544223 OR2AT4A6NND4 320 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 DHRS7CA6NNS2 312 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 ATXN7O15265 892 aaPredicted RBP11.72□□□□□ -0.53
HCFC2-202ENST00000544223 CRYABP02511 175 aaKnown RBP11.72□□□□□ -0.53
HCFC2-202ENST00000544223 COX5BP10606 129 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 COX5AP20674 150 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 PRKACBP22694 351 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 CALCRP30988 508 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 HOXC12P31275 282 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 SNRPD2P62316 118 aaKnown RBP11.72□□□□□ -0.53
HCFC2-202ENST00000544223 C1orf185Q5T7R7 199 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 LHFPL2Q6ZUX7 228 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 TMPRSS13Q9BYE2 586 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 FBLN5Q9UBX5 448 aa11.72□□□□□ -0.53
HCFC2-202ENST00000544223 C7orf66A4D0T2 115 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 TFF1P04155 84 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 MELTFP08582 738 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 TDGF1P3P51864 188 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 UCP2P55851 309 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 PSG7Q13046 419 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 OR2A2Q6IF42 318 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 TMEM229BQ8NBD8 167 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 OR4K15Q8NH41 348 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 COPZ2Q9P299 210 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 RABL2AQ9UBK7 228 aaPredicted RBP11.71□□□□□ -0.53
HCFC2-202ENST00000544223 RABL2BQ9UNT1 228 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 HRNRQ86YZ3 2850 aaPredicted RBP11.71□□□□□ -0.53
HCFC2-202ENST00000544223 ACACBO00763 2458 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 A0A0A6YYH2 397 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 PQLC2LA1A4F0 135 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 A6NJ64 397 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 FABP7O15540 132 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 OR7C1O76099 320 aaPredicted RBP11.71□□□□□ -0.53
HCFC2-202ENST00000544223 ALX3O95076 343 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 CHRM2P08172 466 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 GLI4P10075 376 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 ALDH3B1P43353 468 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 RBMS2Q15434 407 aaKnown RBP11.71□□□□□ -0.53
HCFC2-202ENST00000544223 RNASE10Q5GAN6 216 aaKnown RBP11.71□□□□□ -0.53
HCFC2-202ENST00000544223 ZNF324BQ6AW86 544 aaPredicted RBP11.71□□□□□ -0.53
HCFC2-202ENST00000544223 Q6ZPA2 131 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 BHLHA15Q7RTS1 189 aaPredicted RBP11.71□□□□□ -0.53
HCFC2-202ENST00000544223 WDR86Q86TI4 376 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 CDH26Q8IXH8 852 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 SCPEP1Q9HB40 452 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 TAS2R8Q9NYW2 309 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 PRR13Q9NZ81 148 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 EIF3KQ9UBQ5 218 aaKnown RBP11.71□□□□□ -0.53
HCFC2-202ENST00000544223 ATPIF1Q9UII2 106 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 AK3Q9UIJ7 227 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 VSIG4Q9Y279 399 aa11.71□□□□□ -0.53
HCFC2-202ENST00000544223 CHD3Q12873 2000 aaKnown RBP11.71□□□□□ -0.54
HCFC2-202ENST00000544223 IGHV1-18A0A0C4DH31 117 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 NAP1L6A6NFF2 107 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 UBBP0CG47 229 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 NPY4RP50391 375 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 CEACAM21Q3KPI0 293 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 LIN54Q6MZP7 749 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 GFRALQ6UXV0 394 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 LIX1LQ8IVB5 337 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 OSR2Q8N2R0 312 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 GRPEL2Q8TAA5 225 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 GTF3AQ92664 365 aaKnown RBP11.7□□□□□ -0.54
HCFC2-202ENST00000544223 MSL2Q9HCI7 577 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 ZNF391Q9UJN7 358 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 UTP20O75691 2785 aaKnown RBP11.7□□□□□ -0.54
HCFC2-202ENST00000544223 CACNA1DQ01668 2161 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 FIGNL2A6NMB9 653 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 AKR7A2O43488 359 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 CPT2P23786 658 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
HCFC2-202ENST00000544223 MSMPQ1L6U9 139 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 C4orf46Q504U0 113 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 VHLLQ6RSH7 139 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 MUC20Q8N307 709 aaPredicted RBP11.7□□□□□ -0.54
HCFC2-202ENST00000544223 ADAD2Q8NCV1 583 aaKnown RBP11.7□□□□□ -0.54
HCFC2-202ENST00000544223 FAM57AQ8TBR7 257 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 KLF14Q8TD94 323 aaPredicted RBP11.7□□□□□ -0.54
HCFC2-202ENST00000544223 ST8SIA4Q92187 359 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 ZFYVE26Q68DK2 2539 aa11.7□□□□□ -0.54
HCFC2-202ENST00000544223 A0A0G2JNJ9 132 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 SULT1C2O00338 296 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 IGKV3-15P01624 115 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 ATPAF1Q5TC12 328 aaPredicted RBP11.69□□□□□ -0.54
HCFC2-202ENST00000544223 GLDNQ6ZMI3 551 aaPredicted RBP11.69□□□□□ -0.54
HCFC2-202ENST00000544223 LRP11Q86VZ4 500 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
HCFC2-202ENST00000544223 Q9UFV3 132 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 ANKRD30BLA7E2S9 258 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 M0R1B8 84 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 CD74P04233 296 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 GRPP07492 148 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 AMY2BP19961 511 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 CAPZA1P52907 286 aa11.69□□□□□ -0.54
HCFC2-202ENST00000544223 RPUSD3Q6P087 351 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms