RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 OR51A4Q8NGJ6 313 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ABHD3Q8WU67 409 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 GMPPAQ96IJ6 420 aaPredicted RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 TSPAN32Q96QS1 320 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 DHRS9Q9BPW9 319 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 FGF20Q9NP95 211 aaPredicted RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 CYSLTR2Q9NS75 346 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 FBXL2Q9UKC9 423 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 LAMP3Q9UQV4 416 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 MFSD2BA6NFX1 497 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 LIPT2A6NK58 231 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 PRR33A8MZF0 331 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 SDCBPO00560 298 aaPredicted RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 DHRS3O75911 302 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 TCRBP04435 133 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 FUT3P21217 361 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 NKX2-1P43699 371 aaPredicted RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 FAM219BQ5XKK7 198 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 PRSS45Q7RTY3 260 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 MSRB3Q8IXL7 192 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ARHGEF39Q8N4T4 335 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 TERB2Q8NHR7 220 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 DEDD2Q8WXF8 326 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 EXTL1Q92935 676 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 SLC25A46Q96AG3 418 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 AKR1E2Q96JD6 320 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 METTL17Q9H7H0 456 aaPredicted RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 SAP30LQ9HAJ7 183 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 RGPD3A6NKT7 1758 aaPredicted RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 PCM1Q15154 2024 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 A0A1W2PQM1 296 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 C3orf80F5H4A9 247 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 FCGR2CP31995 323 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 PRDX4Q13162 271 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 LYRM7Q5U5X0 104 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 IGF2-ASQ6U949 168 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 NRARPQ7Z6K4 114 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 RTN4RL2Q86UN3 420 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 OR2M3Q8NG83 312 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 OR4Q3Q8NH05 313 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 PELI1Q96FA3 418 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 C4orf45Q96LM5 186 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 DUSP21Q9H596 190 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 SLC39A9Q9NUM3 307 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 DLEC1Q9Y238 1755 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 A0A1W2PR77 199 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ASPDHA6ND91 283 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 E5RGE8 158 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 CTLA4P16410 223 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 MNX1P50219 401 aaPredicted RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 TCL1AP56279 114 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 FOXL2P58012 376 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM177Q53S58 311 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 CLDN23Q96B33 292 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 PINX1Q96BK5 328 aaKnown RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 MALSU1Q96EH3 234 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 SEC22CQ9BRL7 303 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 GINS3Q9BRX5 216 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 SUCNR1Q9BXA5 334 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 RNF150Q9ULK6 438 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 NSG2Q9Y328 171 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 UGT2A1Q9Y4X1 527 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 TRAV38-1A0A0B4J264 116 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 MDFIC2A0A1B0GVS7 189 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 hADV38S2A0JD32 116 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 OR6C68A6NDL8 312 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 OR5B21A6NL26 309 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 F8W036 122 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 KCNAB3O43448 404 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 DFFBO76075 338 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 NGFP01138 241 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF14P17017 642 aaPredicted RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ELK1P19419 428 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 RTP5Q14D33 572 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 FAM74A1Q5RGS3 127 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ABLIM2Q6H8Q1 611 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 C17orf47Q8NEP4 570 aa6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 FYTTD1Q96QD9 318 aaKnown RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ISG20L2Q9H9L3 353 aaKnown RBP6.12□□□□□ -1.43
SRGAP1-206ENST00000543397 ARID1AO14497 2285 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 H3BMH7 237 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 LRP3O75074 770 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 GNB3P16520 340 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF17P17021 662 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 JUNBP17275 347 aaPredicted RBP6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 M6PRP20645 277 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 CEACAM3P40198 252 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF85Q03923 595 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 VMA21Q3ZAQ7 101 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 FBXW9Q5XUX1 488 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 FRZBQ92765 325 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 PIK3IP1Q96FE7 263 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF430Q9H8G1 570 aaPredicted RBP6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 FAM212BQ9NTI7 297 aaPredicted RBP6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 STARD10Q9Y365 291 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 NINQ8N4C6 2090 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 A0A0D9SG52 128 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 PRR19A6NJB7 356 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 COX7A1P24310 79 aa6.11□□□□□ -1.43
SRGAP1-206ENST00000543397 CACNA1BQ00975 2339 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms