RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 RAB39BQ96DA2 213 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 HES4Q9HCC6 221 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 EXOSC4Q9NPD3 245 aaKnown RBP10.22□□□□□ -0.77
DDX55-210ENST00000543016 TXNL4BQ9NX01 149 aaKnown RBP10.22□□□□□ -0.77
DDX55-210ENST00000543016 IL36GQ9NZH8 169 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 DNAJB11Q9UBS4 358 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 MIOXQ9UGB7 285 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 ISPDA4D126 451 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 AKR7A2O43488 359 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 SYNGR1O43759 233 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 AIREO43918 545 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 TMEM127O75204 238 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 KDM4BO94953 1096 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 NXPH2O95156 264 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 UBBP0CG47 229 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 MTNR1BP49286 362 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 C1orf100Q5SVJ3 147 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 FAM27D1Q5T7N8 215 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 ELP2Q6IA86 826 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 C22orf42Q6IC83 251 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 ACP7Q6ZNF0 438 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 NLRC3Q7RTR2 1065 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 LYPD6Q86Y78 171 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 JAGN1Q8N5M9 183 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 BOLLQ8N9W6 283 aaKnown RBP10.21□□□□□ -0.77
DDX55-210ENST00000543016 Q8NFD4 153 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 TNFAIP8L1Q8WVP5 186 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.77
DDX55-210ENST00000543016 ORAI1Q96D31 301 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 MRPS24Q96EL2 167 aaKnown RBP10.21□□□□□ -0.77
DDX55-210ENST00000543016 POM121Q96HA1 1249 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 GAL3ST1Q99999 423 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 CHCHD6Q9BRQ6 235 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 METTL9Q9H1A3 318 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 PPIL3Q9H2H8 161 aaKnown RBP10.21□□□□□ -0.77
DDX55-210ENST00000543016 SMURF1Q9HCE7 757 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 DCAF16Q9NXF7 216 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 MTCH1Q9NZJ7 389 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 NLKQ9UBE8 527 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 KAAG1Q9UBP8 84 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 GLS2Q9UI32 602 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 PCDHB10Q9UN67 800 aa10.21□□□□□ -0.77
DDX55-210ENST00000543016 A0A096LNT2 108 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 IGHV4-61A0A0C4DH41 118 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 CYSRT1A8MQ03 144 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 H3BUI4 141 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.2□□□□□ -0.78
DDX55-210ENST00000543016 KNG1P01042 644 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 ADRA2CP18825 462 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 GADD45AP24522 165 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 CFPP27918 469 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 RSU1Q15404 277 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 SPIN3Q5JUX0 258 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 AVPI1Q5T686 147 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 CRIP3Q6Q6R5 217 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 SLC36A1Q7Z2H8 476 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 FAM58AQ8N1B3 248 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 OR6M1Q8NGM8 313 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 TBC1D15Q8TC07 691 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 MED30Q96HR3 178 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 SPACA5Q96QH8 159 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 TMEM246Q9BRR3 403 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 OR51E2Q9H255 320 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 PATZ1Q9HBE1 687 aaKnown RBP10.2□□□□□ -0.78
DDX55-210ENST00000543016 V9GY05 133 aa10.2□□□□□ -0.78
DDX55-210ENST00000543016 LOC100506127A0A0U1RQW1 187 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 NKX6-3A6NJ46 265 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 OR2AT4A6NND4 320 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 CEACAM18A8MTB9 384 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 C3orf80F5H4A9 247 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 SLC17A2O00624 439 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 TNFRSF13BO14836 293 aaPredicted RBP10.19□□□□□ -0.78
DDX55-210ENST00000543016 GPR37O15354 613 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 SPRY1O43609 319 aaPredicted RBP10.19□□□□□ -0.78
DDX55-210ENST00000543016 PLATP00750 562 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 CSTBP04080 98 aaKnown RBP10.19□□□□□ -0.78
DDX55-210ENST00000543016 EGR1P18146 543 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 RAB3BP20337 219 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 CD80P33681 288 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 GZMKP49863 264 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 NPY4RP50391 375 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 FGF12P61328 243 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 ZNF146Q15072 292 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 STUMQ69YW2 141 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 SFRP4Q6FHJ7 346 aaPredicted RBP10.19□□□□□ -0.78
DDX55-210ENST00000543016 ANKRD13BQ86YJ7 626 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 CROCCP3Q8IVE0 287 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 DEFB108BQ8NET1 73 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 OR5D18Q8NGL1 313 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 CLDND2Q8NHS1 167 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 ANGPTL6Q8NI99 470 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 EMG1Q92979 244 aaKnown RBP10.19□□□□□ -0.78
DDX55-210ENST00000543016 SLAMF9Q96A28 289 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 RFT1Q96AA3 541 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 NEIL1Q96FI4 390 aaPredicted RBP10.19□□□□□ -0.78
DDX55-210ENST00000543016 C1orf159Q96HA4 380 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 COX4I2Q96KJ9 171 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 BCL7BQ9BQE9 202 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 FUNDC2Q9BWH2 189 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms