RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 SLC15A3Q8IY34 581 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 BATF2Q8N1L9 274 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 MREGQ8N565 214 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 ZNF676Q8N7Q3 588 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 LRRC75AQ8NAA5 344 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 OR13C2Q8NGS9 318 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 TRMT10AQ8TBZ6 339 aaKnown RBP3.72□□□□□ -1.81
LIMS1-214ENST00000542845 LIPHQ8WWY8 451 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 LZICQ8WZA0 190 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 PIGCQ92535 297 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 RNF170Q96K19 258 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 RTL8AQ9BWD3 113 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 PAPOLGQ9BWT3 736 aaKnown RBP3.72□□□□□ -1.81
LIMS1-214ENST00000542845 TUBA4BQ9H853 241 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 ISYNA1Q9NPH2 558 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 SLC25A37Q9NYZ2 338 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 RHCGQ9UBD6 479 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 AASSQ9UDR5 926 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 OR14J1Q9UGF5 321 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 RHBDD3Q9Y3P4 386 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 SIRT4Q9Y6E7 314 aaPredicted RBP3.72□□□□□ -1.81
LIMS1-214ENST00000542845 ABCA13Q86UQ4 5058 aa3.72□□□□□ -1.81
LIMS1-214ENST00000542845 KIAA2026Q5HYC2 2103 aa3.71□□□□□ -1.81
LIMS1-214ENST00000542845 MUC4Q99102 2169 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 FAM172BPA6NC97 362 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 RFPL4AA6NLU0 287 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 LINC01548A6NM66 108 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF850A8MQ14 1090 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 C17orf98A8MV24 154 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 RFPL4AL1F8VTS6 287 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 DCTN6O00399 190 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 OVOL1O14753 267 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 UBDO15205 165 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 AHCYL1O43865 530 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 BRI3O95415 125 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 TK1P04183 234 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 CD14P08571 375 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 IGHV1-8P0DP01 117 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 ARSBP15848 533 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 PPIBP23284 216 aaKnown RBP3.71□□□□□ -1.82
LIMS1-214ENST00000542845 PRDX2P32119 198 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 DDOSTP39656 456 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 RPS27P42677 84 aaKnown RBP3.71□□□□□ -1.82
LIMS1-214ENST00000542845 CDKN2AP42771 156 aaKnown RBP3.71□□□□□ -1.82
LIMS1-214ENST00000542845 GPR4P46093 362 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 YAP1P46937 504 aaKnown RBP3.71□□□□□ -1.82
LIMS1-214ENST00000542845 ARHGDIBP52566 201 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 PRDX4Q13162 271 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 STX3Q13277 289 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 RBM39Q14498 530 aaKnown RBP3.71□□□□□ -1.82
LIMS1-214ENST00000542845 HNF4GQ14541 408 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 PNLIPRP3Q17RR3 467 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 VMACQ2NL98 169 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 SLC36A3Q495N2 470 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 ZBED5Q49AG3 693 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 PAGE3Q5JUK9 113 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 MINOS1Q5TGZ0 78 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 RNLSQ5VYX0 342 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 LCN8Q6JVE9 175 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 FAM53AQ6NSI3 398 aaPredicted RBP3.71□□□□□ -1.82
LIMS1-214ENST00000542845 SLC18B1Q6NT16 456 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 MSANTD1Q6ZTZ1 278 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 PTCHD4Q6ZW05 846 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 SLC16A9Q7RTY1 509 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 EGFL6Q8IUX8 553 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 CPOQ8IVL8 374 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 FOXRED2Q8IWF2 684 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 NRMQ8IXM6 262 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 TIGD4Q8IY51 512 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 DRAM1Q8N682 238 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 CD177Q8N6Q3 437 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 C11orf65Q8NCR3 313 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 OR11H6Q8NGC7 330 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 OR1N2Q8NGR9 330 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 OR10Z1Q8NGY1 313 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 ABHD5Q8WTS1 349 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 ST8SIA2Q92186 375 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 DCUN1D4Q92564 292 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF488Q96MN9 340 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 HIST1H2AAQ96QV6 131 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 SORT1Q99523 831 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 PAIP2Q9BPZ3 127 aaKnown RBP3.71□□□□□ -1.82
LIMS1-214ENST00000542845 COPS4Q9BT78 406 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 IKZF5Q9H5V7 419 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 TMEM38AQ9H6F2 299 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 NMNAT1Q9HAN9 279 aaPredicted RBP3.71□□□□□ -1.82
LIMS1-214ENST00000542845 CENPMQ9NSP4 180 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 VAPAQ9P0L0 249 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 PYCARDQ9ULZ3 195 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 A4GNTQ9UNA3 340 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 LRP12Q9Y561 859 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 IER3IP1Q9Y5U9 82 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 MINOS1-NBL1R4GNA1 71 aa3.71□□□□□ -1.82
LIMS1-214ENST00000542845 IGHV2-26A0A0B4J1V2 119 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 M0QZK8 103 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 AP4M1O00189 453 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 CCRL2O00421 344 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 XRCC2O43543 280 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 SERPINA1P01009 418 aa3.7□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF728P0DKX0 622 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms