RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	GPR173	Q9NS66	373 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	DECR2	Q9NUI1	292 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	FBXO7	Q9Y3I1	522 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838		A0A1B0GV50	99 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	MED19	A0JLT2	244 aa	Predicted RBP	11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	AQP7P3	A6NL99	342 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	TXNL1	O43396	289 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	PIAS2	O75928	621 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	OR2J2	O76002	312 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	GLI4	P10075	376 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	UCP2	P55851	309 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	SLC35A1	P78382	337 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	TAF9	Q16594	264 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	TSPO2	Q5TGU0	170 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	HSD17B11	Q8NBQ5	300 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	TCEAL7	Q9BRU2	100 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	SH3BGRL3	Q9H299	93 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	KCNJ16	Q9NPI9	418 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	NECAP2	Q9NVZ3	263 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	AK3	Q9UIJ7	227 aa		11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	NXT1	Q9UKK6	140 aa	Known RBP	11.29	□□□□□ -0.6
DDX11-223	ENST00000542838	BRWD1	Q9NSI6	2320 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	C2CD4D	B7Z1M9	353 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	ANGPTL7	O43827	346 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	NQO2	P16083	231 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	CSNK1A1	P48729	337 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	SULT1A1	P50225	295 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	MTCP1	P56278	107 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	RHBDD2	Q6NTF9	364 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	PLXDC2	Q6UX71	529 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	NELFA	Q9H3P2	528 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	IGLV3-32	A0A0A0MS00	114 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	TRAV20	A0A0B4J274	112 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838		A0A1W2PPE2	198 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	DBH	P09172	617 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	OR13C7	P0DN81	318 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	PMEL	P40967	661 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	OR2B8P	P59922	312 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	ENDOG	Q14249	297 aa	Known RBP	11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	PHLDA2	Q53GA4	152 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	PHYHD1	Q5SRE7	291 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	PPP1R3B	Q86XI6	285 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	PBDC1	Q9BVG4	233 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	METTL9	Q9H1A3	318 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	ZNF581	Q9P0T4	197 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	SEMA5B	Q9P283	1151 aa		11.28	□□□□□ -0.6
DDX11-223	ENST00000542838	STRAP	Q9Y3F4	350 aa	Known RBP	11.28	□□□□□ -0.6
DDX11-223	ENST00000542838		M0R135	149 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	SPRY1	O43609	319 aa	Predicted RBP	11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	SUCLG1	P53597	346 aa	Known RBP	11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	NXPH1	P58417	271 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	NHLH2	Q02577	135 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	RSU1	Q15404	277 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	NKAIN1	Q4KMZ8	207 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	GPR157	Q5UAW9	335 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	FBXW12	Q6X9E4	464 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	OR52M1	Q8NGK5	317 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	SLC22A8	Q8TCC7	542 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	ZNF799	Q96GE5	643 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	REEP6	Q96HR9	211 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	GNRHR2	Q96P88	292 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	WDR77	Q9BQA1	342 aa	Predicted RBP	11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	SLC35B3	Q9H1N7	401 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	MYOT	Q9UBF9	498 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	HDGFL3	Q9Y3E1	203 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	SPEG	Q15772	3267 aa		11.27	□□□□□ -0.6
DDX11-223	ENST00000542838	IGLV3-12	A0A075B6K2	115 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	IGHV2-5	P01817	119 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	LTBR	P36941	435 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	RHEB	Q15382	184 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	KMT5C	Q86Y97	462 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	ZNF565	Q8N9K5	539 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	OR1J1	Q8NGS3	322 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	TCTEX1D2	Q8WW35	142 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	GALNT14	Q96FL9	552 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	ZDHHC8	Q9ULC8	765 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	ABCA7	Q8IZY2	2146 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	FAM230A	A0A1W2PPH8	454 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	ZFAND5	O76080	213 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	OR8U8	P0C7N1	319 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	NR2C1	P13056	603 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	DUSP1	P28562	367 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	RAB5C	P51148	216 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	FAM209B	Q5JX69	171 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	LIAT1	Q6ZQX7	453 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	LURAP1L	Q8IV03	231 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	C20orf196	Q8IYI0	205 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	OR5L1	Q8NGL2	311 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	DYRK2	Q92630	601 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	RBM24	Q9BX46	236 aa	Known RBP	11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	SUCNR1	Q9BXA5	334 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	PLEK2	Q9NYT0	353 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	MIOX	Q9UGB7	285 aa		11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	RCL1	Q9Y2P8	373 aa	Known RBP	11.27	□□□□□ -0.61
DDX11-223	ENST00000542838	EML6	Q6ZMW3	1958 aa		11.26	□□□□□ -0.61
DDX11-223	ENST00000542838	MYO15A	Q9UKN7	3530 aa		11.26	□□□□□ -0.61
DDX11-223	ENST00000542838	NSG1	A0A0A6YYJ2	146 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms