RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 C2orf50Q96LR7 162 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 AQP10Q96PS8 301 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 LINC00470Q9BZP3 86 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 WNT5BQ9H1J7 359 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 GPR35Q9HC97 309 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF701Q9NV72 531 aaPredicted RBP5.69□□□□□ -1.5
PTPRO-208ENST00000542557 PLEKHJ1Q9NW61 149 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 ANXA10Q9UJ72 324 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 WDFY3Q8IZQ1 3526 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 IGKV1-27A0A075B6S5 117 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 LOC105371267A0A1B0GV96 52 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 H0YIZ8 118 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 SDCBPO00560 298 aaPredicted RBP5.69□□□□□ -1.5
PTPRO-208ENST00000542557 FGF16O43320 207 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 XRCC2O43543 280 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 CSTBP04080 98 aaKnown RBP5.69□□□□□ -1.5
PTPRO-208ENST00000542557 MMP7P09237 267 aaPredicted RBP5.69□□□□□ -1.5
PTPRO-208ENST00000542557 GABRR1P24046 479 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 CHATP28329 748 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 CLDN15P56746 228 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 RSU1Q15404 277 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 CEACAM16Q2WEN9 425 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 BEX5Q5H9J7 111 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 DMRTC1Q5HYR2 192 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 UQCC3Q6UW78 93 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 RAB11FIP2Q7L804 512 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 AKR7LQ8NHP1 331 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 SPSB4Q96A44 273 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 PRDM14Q9GZV8 571 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 PIGMQ9H3S5 423 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 LDAHQ9H6V9 325 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 C1orf123Q9NWV4 160 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 MEMO1Q9Y316 297 aa5.69□□□□□ -1.5
PTPRO-208ENST00000542557 RAB19A4D1S5 217 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 PINLYPA6NC86 204 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 MSTNO14793 375 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 ADAP1O75689 374 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 TRAPPC6AO75865 159 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 FARS2O95363 451 aaKnown RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 NRASP01111 189 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 PI3P19957 117 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 GLRA1P23415 457 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 PTGER4P35408 488 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 PMELP40967 661 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 FUT6P51993 359 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 FAM3AP98173 230 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 NKAPLQ5M9Q1 402 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 TFAP2EQ6VUC0 442 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 LINC00469Q8N7U9 141 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 MAFIPQ8WZ33 124 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF775Q96BV0 537 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 C1QTNF5Q9BXJ0 243 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF703Q9H7S9 590 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 PCDHB16Q9NRJ7 776 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 CYTL1Q9NRR1 136 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 TMEM100Q9NV29 134 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 CFAP54Q96N23 3096 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 IGKV1D-8A0A087WSZ0 117 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF816-ZNF321PA0A0X1KG74 233 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 FAM230AA0A1W2PPH8 454 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 CRYM-AS1A6NIL9 109 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 NUDT19A8MXV4 375 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 LGALS8O00214 317 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 ANGPTL7O43827 346 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 IFNA2P01563 188 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 FCGR3AP08637 254 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 RBMXP38159 391 aaKnown RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 COLCA1Q6ZS62 124 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 SGPP2Q8IWX5 399 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 SKA3Q8IX90 412 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 BAP18Q8IXM2 172 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 RRNAD1Q96FB5 475 aaKnown RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 OR10C1Q96KK4 312 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 FAM173AQ9BQD7 235 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF2Q9BSG1 426 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 BCO1Q9HAY6 547 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 NECAP2Q9NVZ3 263 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 PPP1R14DQ9NXH3 145 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 LRFN1Q9P244 771 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 B4GALT7Q9UBV7 327 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 SLC7A11Q9UPY5 501 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 PMS2P1A4D2B8 440 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 C21orf140B9A014 251 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 SPRY1O43609 319 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 OR5H8P0DN80 308 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 MPLP40238 635 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 TAF9Q16594 264 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 RSPO4Q2I0M5 234 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 ELP2Q6IA86 826 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 DHRS11Q6UWP2 260 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 OSR2Q8N2R0 312 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 OR2C3Q8N628 320 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 ABHD3Q8WU67 409 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 SLC39A7Q92504 469 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 ZNF845Q96IR2 970 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 CMSS1Q9BQ75 279 aaKnown RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 GPR87Q9BY21 358 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 METTL8Q9H825 291 aaKnown RBP5.68□□□□□ -1.5
PTPRO-208ENST00000542557 TAS2R3Q9NYW6 316 aa5.68□□□□□ -1.5
PTPRO-208ENST00000542557 OR5AC2Q9NZP5 309 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms