RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 DHCR7Q9UBM7 475 aaKnown RBP9.14□□□□□ -0.95
CHFR-219ENST00000541341 DTX4Q9Y2E6 619 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 EMC9Q9Y3B6 208 aa9.14□□□□□ -0.95
CHFR-219ENST00000541341 A0A0A6YYC8 382 aaPredicted RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 C7orf77A4D0Y5 90 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 I3L1I5 382 aaPredicted RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 M0R036 132 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 PLPP3O14495 311 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 ZNF354AO60765 605 aaPredicted RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 DEDDO75618 318 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 CSN2P05814 226 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 GLAP06280 429 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 FBXO45P0C2W1 286 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 VSIG8P0DPA2 414 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 APOBEC1P41238 236 aaKnown RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 P2RY1P47900 373 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 CDX1P47902 265 aaPredicted RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 CAMLGP49069 296 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 ARHGDIBP52566 201 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 GRB2P62993 217 aaKnown RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 EGR4Q05215 589 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 SPOCK1Q08629 439 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 CLINT1Q14677 625 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 ZNF239Q16600 458 aaKnown RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 GUK1Q16774 197 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 NKAIN1Q4KMZ8 207 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 THEM4Q5T1C6 240 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 Q6ZRG5 221 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 DOK3Q7L591 496 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 SULF2Q8IWU5 870 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 FAM185AQ8N0U4 392 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 CCDC71LQ8N9Z2 235 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 ADPRHL1Q8NDY3 354 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 TMEM52Q8NDY8 209 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 SLC26A10Q8NG04 563 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 SLC22A8Q8TCC7 542 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 CPNE4Q96A23 557 aaPredicted RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 DDIT4LQ96D03 193 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 RBMXL1Q96E39 390 aaKnown RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 MMABQ96EY8 250 aaPredicted RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 SPIN2AQ99865 258 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 SPIN2BQ9BPZ2 258 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 GINS3Q9BRX5 216 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 EIF5A2Q9GZV4 153 aaKnown RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 OR10A2Q9H208 303 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 HIPK2Q9H2X6 1198 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 CNTD2Q9H8S5 307 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 WDR54Q9H977 334 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 OR2S2Q9NQN1 319 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 PARPBPQ9NWS1 579 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 GFOD1Q9NXC2 390 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 COPS7AQ9UBW8 275 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 MIOXQ9UGB7 285 aa9.13□□□□□ -0.95
CHFR-219ENST00000541341 MRPS28Q9Y2Q9 187 aaKnown RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 PTRH2Q9Y3E5 179 aaKnown RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 RP1L1Q8IWN7 2480 aaPredicted RBP9.13□□□□□ -0.95
CHFR-219ENST00000541341 SVILO95425 2214 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 DIDO1Q9BTC0 2240 aaKnown RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 TMED7-TICAM2A0A0A6YYA0 188 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 VSTM2BA6NLU5 285 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 C17orf105B2RV13 164 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 ZNF878C9JN71 531 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 DCTN6O00399 190 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 HCRTR2O43614 444 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 NPIPB7O75200 414 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 NDUFS6O75380 124 aaKnown RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 CEACAM4O75871 244 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 NUDT14O95848 222 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 PNPP00491 289 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 IGHV2-70P01814 119 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 MBPP02686 304 aaPredicted RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 CYC1P08574 325 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 CD63P08962 238 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 MMP9P14780 707 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 ZNF44P15621 663 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 FBLP22087 321 aaKnown RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 MSX1P28360 303 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 FCGR2CP31995 323 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 GUCA1AP43080 201 aaPredicted RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 HAAOP46952 286 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 ZNF84P51523 738 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 SLC35A1P78382 337 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 PNRC1Q12796 327 aaPredicted RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 GNMTQ14749 295 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 OR7A5Q15622 319 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 ELAVL1Q15717 326 aaKnown RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 SOHLH1Q5JUK2 328 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 RPUSD3Q6P087 351 aaKnown RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 DHRS11Q6UWP2 260 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 H1FNTQ75WM6 255 aaPredicted RBP9.12□□□□□ -0.95
CHFR-219ENST00000541341 SLC29A4Q7RTT9 530 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 C9orf40Q8IXQ3 194 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 FAM89BQ8N5H3 189 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 LRTM2Q8N967 370 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 ZNF565Q8N9K5 539 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 OR4S1Q8NGB4 309 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 OR4N2Q8NGD1 307 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 OR5T3Q8NGG3 340 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 OR4D6Q8NGJ1 314 aa9.12□□□□□ -0.95
CHFR-219ENST00000541341 C2CD4CQ8TF44 421 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms