RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 C1orf196B1AJZ1 125 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 ONECUT2O95948 504 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 PPT1P50897 306 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 SNRPEP62304 92 aaKnown RBP10.72□□□□□ -0.69
NPC1-202ENST00000540608 TMEM187Q14656 261 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 GUSBP11Q6P575 273 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 SPTSSAQ969W0 71 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 HIST1H2BAQ96A08 127 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 GALNT14Q96FL9 552 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 SPSB2Q99619 263 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 CRB3Q9BUF7 120 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 SCRT1Q9BWW7 348 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 NAA60Q9H7X0 242 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 TUBA4BQ9H853 241 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 RPS10P5Q9NQ39 176 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 AK3Q9UIJ7 227 aa10.72□□□□□ -0.69
NPC1-202ENST00000540608 CHCHD2Q9Y6H1 151 aaPredicted RBP10.72□□□□□ -0.69
NPC1-202ENST00000540608 DBHP09172 617 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 DTYMKP23919 212 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 RRADP55042 308 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 MIDNQ504T8 468 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 AKIRIN2Q53H80 203 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 GPR157Q5UAW9 335 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 ZNF385CQ66K41 422 aaPredicted RBP10.71□□□□□ -0.69
NPC1-202ENST00000540608 SPSB1Q96BD6 273 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 BSCL2Q96G97 398 aaPredicted RBP10.71□□□□□ -0.69
NPC1-202ENST00000540608 ZNF385AQ96PM9 386 aaKnown RBP10.71□□□□□ -0.69
NPC1-202ENST00000540608 GINS3Q9BRX5 216 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 RBM24Q9BX46 236 aaKnown RBP10.71□□□□□ -0.69
NPC1-202ENST00000540608 PARP12Q9H0J9 701 aaKnown RBP10.71□□□□□ -0.69
NPC1-202ENST00000540608 A0A087WZY1 265 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 BORCS7-ASMTA0A0B4J1R7 106 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 ZNF850A8MQ14 1090 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 TP53I11O14683 189 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 DHHO43323 396 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 GPR137BO60478 399 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 MT-ND4LP03901 98 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 CD63P08962 238 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 ZNF728P0DKX0 622 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 SUCLG1P53597 346 aaKnown RBP10.71□□□□□ -0.69
NPC1-202ENST00000540608 GUK1Q16774 197 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 SP6Q3SY56 376 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 LRTM2Q8N967 370 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 WFDC1Q9HC57 220 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 GPR173Q9NS66 373 aa10.71□□□□□ -0.69
NPC1-202ENST00000540608 C19orf25Q9UFG5 118 aaPredicted RBP10.71□□□□□ -0.69
NPC1-202ENST00000540608 A0A1W2PQM1 296 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 C5orf52A6NGY3 159 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 H7C1Q1 480 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 EIF1BO60739 113 aaKnown RBP10.71□□□□□ -0.7
NPC1-202ENST00000540608 VAMP5O95183 116 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 ACAA1P09110 424 aaPredicted RBP10.71□□□□□ -0.7
NPC1-202ENST00000540608 OR5AC1P0C628 307 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 AKR1C3P42330 323 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 STARD6P59095 220 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 RSU1Q15404 277 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 TAF9Q16594 264 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 RSPO4Q2I0M5 234 aaPredicted RBP10.71□□□□□ -0.7
NPC1-202ENST00000540608 SNAI3Q3KNW1 292 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 ABCA11PQ4W5N1 156 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 PRAMEF20Q5VT98 475 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 CLEC9AQ6UXN8 241 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 TMEM123Q8N131 208 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 SPEM1Q8N4L4 309 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 ZNF561Q8N587 486 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 RTN4IP1Q8WWV3 396 aaPredicted RBP10.71□□□□□ -0.7
NPC1-202ENST00000540608 RGCCQ9H4X1 137 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 PLEK2Q9NYT0 353 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 LUZP4Q9P127 313 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 RARRES3Q9UL19 164 aa10.71□□□□□ -0.7
NPC1-202ENST00000540608 C7orf77A4D0Y5 90 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 NPIPA2E9PIF3 369 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 NPIPA3F8WFD2 350 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 MASP2O00187 686 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 NME2P1O60361 137 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 ZNF44P15621 663 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 OPRM1P35372 400 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 P2RY1P47900 373 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 LILRB1Q8NHL6 650 aaPredicted RBP10.7□□□□□ -0.7
NPC1-202ENST00000540608 MED12Q93074 2177 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 TOMM40LQ969M1 308 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 FBXO17Q96EF6 278 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 C18orf12Q96KH6 178 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 SUCNR1Q9BXA5 334 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 ANGPTL4Q9BY76 406 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 AKIRIN1Q9H9L7 192 aaPredicted RBP10.7□□□□□ -0.7
NPC1-202ENST00000540608 MYO7BQ6PIF6 2116 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 ANGPTL7O43827 346 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 RAB5CP51148 216 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 CCL7P80098 99 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 CHAF1BQ13112 559 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 AWAT1Q58HT5 328 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 ASCL4Q6XD76 172 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 LIAT1Q6ZQX7 453 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 LYZL2Q7Z4W2 148 aa10.7□□□□□ -0.7
NPC1-202ENST00000540608 INTS12Q96CB8 462 aaKnown RBP10.7□□□□□ -0.7
NPC1-202ENST00000540608 NAA11Q9BSU3 229 aaPredicted RBP10.7□□□□□ -0.7
NPC1-202ENST00000540608 UBE2CO00762 179 aa10.69□□□□□ -0.7
NPC1-202ENST00000540608 SNRNP70P08621 437 aaKnown RBP10.69□□□□□ -0.7
NPC1-202ENST00000540608 AGAP20933 346 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms