RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 LIM2P55344 173 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 GRB2P62993 217 aaKnown RBP5.42□□□□□ -1.54
PTPRD-214ENST00000540109 NHLH1Q02575 133 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 SPRED2Q7Z698 418 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 OR4F5Q8NH21 305 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 FAM3DQ96BQ1 224 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 TCTN2Q96GX1 697 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 C14orf144Q96I85 54 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 OR4F4Q96R69 305 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 PDCD1LG2Q9BQ51 273 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 GSX1Q9H4S2 264 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-214ENST00000540109 FAM206AQ9NX38 181 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 FUT9Q9Y231 359 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 ANTXRLA6NF34 631 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 SERPINE3A8MV23 424 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 DOK2O60496 412 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 HPP00738 406 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 IL12BP29460 328 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 FASLGP48023 281 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 EMP2P54851 167 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 EIF3IQ13347 325 aaKnown RBP5.42□□□□□ -1.54
PTPRD-214ENST00000540109 FFAR4Q5NUL3 377 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 Q6ZSR6 202 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 MOB3CQ70IA8 216 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 MED25Q71SY5 747 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 DAZAP1Q96EP5 407 aaKnown RBP5.42□□□□□ -1.54
PTPRD-214ENST00000540109 OR1A1Q9P1Q5 309 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF443Q9Y2A4 671 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-214ENST00000540109 TRPM6Q9BX84 2022 aa5.42□□□□□ -1.54
PTPRD-214ENST00000540109 ANKRD20A5PA0PJZ0 165 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 GAGE10A6NGK3 116 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 GALR3O60755 368 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 AADACP22760 399 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 UQCRFS1P47985 274 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 GABREP78334 506 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 GUCA2AQ02747 115 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF85Q03923 595 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF660Q6AZW8 331 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 SFTPA1Q8IWL2 248 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 TDHQ8IZJ6 230 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 OR51A4Q8NGJ6 313 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 KLK6Q92876 244 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ABHD1Q96SE0 405 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PRRX2Q99811 253 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 KIAA1324LA8MWY0 1029 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 OR2A4O95047 310 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 NUDT3O95989 172 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 GABRG2P18507 467 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 RPS4Y1P22090 263 aaKnown RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 MSX1P28360 303 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 RBM11P57052 281 aaKnown RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 LCN2P80188 198 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 TGFBR3Q03167 851 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 DMWDQ09019 674 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 C19orf48Q6RUI8 117 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 C16orf54Q6UWD8 224 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF813Q6ZN06 617 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 MISPQ8IVT2 679 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 FLVCR1-AS1Q8TAF5 88 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PGAM5Q96HS1 289 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 OR2A7Q96R45 310 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 WDR76Q9H967 626 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 HSD17B6O14756 317 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 DLEU1O43261 78 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 SLC16A7O60669 478 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 GLCEO94923 617 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 CDS2O95674 445 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 HAND1O96004 215 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PTGER1P34995 402 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 FAM53BQ14153 422 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 GPR18Q14330 331 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 HERPUD1Q15011 391 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 CDK5R1Q15078 307 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ELOBQ15370 118 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 TMEM241Q24JQ0 296 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PRSS53Q2L4Q9 553 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 OR5A2Q8NGI9 324 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 MVB12AQ96EY5 273 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 UTP23Q9BRU9 249 aaKnown RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 NECAP2Q9NVZ3 263 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 TICRRQ7Z2Z1 1910 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PRAMEF27A3QJZ7 478 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PRAMEF25A6NGN4 478 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 UBE2CO00762 179 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 MT-ATP6P00846 226 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 HSPB1P04792 205 aaKnown RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 CRHP06850 196 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 ZNF728P0DKX0 622 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 GLI4P10075 376 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 CD27P26842 260 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 CD200P41217 278 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 RPS18P62269 152 aaKnown RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 SRSF4Q08170 494 aaKnown RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PRAMEF5Q5TYX0 476 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PRAMEF6Q5VXH4 476 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 DIO2Q92813 273 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 OR8B4Q96RC9 309 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 RAB40CQ96S21 281 aa5.41□□□□□ -1.54
PTPRD-214ENST00000540109 NAA11Q9BSU3 229 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-214ENST00000540109 PHF7Q9BWX1 381 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms