RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 LGALS14Q8TCE9 139 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ERGIC1Q969X5 290 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 KCTD12Q96CX2 325 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 S100A13Q99584 98 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ELL3Q9HB65 397 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ABRACLQ9P1F3 81 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 PLEKHA6Q9Y2H5 1048 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 POLDIP2Q9Y2S7 368 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ITPR3Q14573 2671 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 VPS13CQ709C8 3753 aa15.95■□□□□ 0.14
TNFRSF1A-213ENST00000540022 hCG_1807616A0A1W2PRN6 198 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 AKR7A2O43488 359 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CDC14BO60729 498 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 LY6HO94772 140 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 KDM4BO94953 1096 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 BPNT1O95861 308 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CYB5AP00167 134 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CALCBP10092 127 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 BCL3P20749 454 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 QRFPP83859 136 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 PLA2G7Q13093 441 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 RSU1Q15404 277 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ZNF404Q494X3 552 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SLC22A6Q4U2R8 563 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 Q8TCH9 128 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 NEU4Q8WWR8 484 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 AP3S1Q92572 193 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 NXF2Q9GZY0 626 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 METTL9Q9H1A3 318 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 DCAF16Q9NXF7 216 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 GHRLQ9UBU3 117 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 IGHV1-69-2A0A0G2JMI3 117 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 TMEM272A0A1B0GTI8 110 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 TRAPPC2LH3BP13 241 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 LDLRAD4O15165 306 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 UBBP0CG47 229 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 PGA5P0DJD9 388 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CFHR2P36980 270 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ERVK11-1P61568 191 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 GCSAMQ8N6F7 178 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 POC1AQ8NBT0 407 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 TMEM104Q8NE00 496 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 MCFD2Q8NI22 146 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 LRRC29Q8WV35 223 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CEP19Q96LK0 163 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 NRIP2Q9BQI9 281 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 RBFOX1Q9NWB1 397 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 IL36GQ9NZH8 169 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 COMMD3Q9UBI1 195 aa15.94■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ARFGEF3Q5TH69 2177 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 A0A075B6Q4 140 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 TMEM14DPA8MWL7 114 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 NOS1APO75052 506 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 HTR3BO95264 441 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ACAA1P09110 424 aaPredicted RBP15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SERPINA2P20848 420 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 COL8A2P25067 703 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 GMFBP60983 142 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 UNC119Q13432 240 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 OR10Z1Q8NGY1 313 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ACOT12Q8WYK0 555 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CCL17Q92583 94 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 FAM46BQ96A09 425 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 MRI1Q9BV20 369 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CXorf56Q9H5V9 222 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 RNF7Q9UBF6 113 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SPATA2Q9UM82 520 aa15.93■□□□□ 0.14
TNFRSF1A-213ENST00000540022 LYNX1G3V0Z9 82 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CTDSP2O14595 271 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 WNT9BO14905 357 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 DSCAMO60469 2012 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ZNF780AO75290 641 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CYB5R3P00387 301 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 LHBP01229 141 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 LYNX1P0DP58 116 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 EGR1P18146 543 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 EFNB2P52799 333 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SCAND1P57086 179 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 DYNC1I2Q13409 638 aaKnown RBP15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ZNF181Q2M3W8 571 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 Q8NFD4 153 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 OR11L1Q8NGX0 322 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 YIPF5Q969M3 257 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 WDR13Q9H1Z4 485 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 BANF2Q9H503 90 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 TMEM106BQ9NUM4 274 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 PTTG2Q9NZH5 202 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 FBLN5Q9UBX5 448 aa15.92■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ARID1AO14497 2285 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 SRRM5B3KS81 715 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CRTAPO75718 401 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CSTBP04080 98 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 RANBP1P43487 201 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 BMXP51813 675 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 CAPZA1P52907 286 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 GPR176Q14439 515 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 FAM201AQ5SY85 155 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 ELP2Q6IA86 826 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 OR2W3Q7Z3T1 314 aa15.91■□□□□ 0.14
TNFRSF1A-213ENST00000540022 BOLLQ8N9W6 283 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms