RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 CXCL16Q9H2A7 254 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 ZMAT3Q9HA38 289 aaKnown RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 PRSS16Q9NQE7 514 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 AHSPQ9NZD4 102 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 SMCHD1A6NHR9 2005 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 CKAP5Q14008 2032 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 NUP205Q92621 2012 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 UBR3Q6ZT12 1888 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 KIF26AQ9ULI4 1882 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 KIAA1217Q5T5P2 1943 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 C13orf42A0A1B0GVH6 325 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 DUXBA0A1W2PPF3 345 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 TMEM189A5PLL7 270 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 AQP7P3A6NL99 342 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF891A8MT65 544 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 C17orf105B2RV13 164 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 J3QR89 54 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 M0R3H8 397 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 PQBP1O60828 265 aaKnown RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 RAMP2O60895 175 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 PITX3O75364 302 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 IGHG4P01861 327 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 ZGLP1P0C6A0 271 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 IGLC1P0CG04 106 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 BCL2P10415 239 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 CCL2P13500 99 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 F3P13726 295 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 MMP9P14780 707 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 GLB1P16278 677 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 HMGA1P17096 107 aaKnown RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 KITLGP21583 273 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 SLC6A6P31641 620 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 CDKN2AP42771 156 aaKnown RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 TSFMP43897 325 aaKnown RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 GPR6P46095 362 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 ID4P47928 161 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 PRLHRP49683 370 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 ATP5IP56385 69 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 CLDN15P56746 228 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 RPL15P61313 204 aaKnown RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 TBPL1P62380 186 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 JAG1P78504 1218 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 ARG2P78540 354 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 CDC42EP1Q00587 391 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 MFGE8Q08431 387 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 ODF1Q14990 250 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 P2RY6Q15077 328 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 TCEAL5Q5H9L2 206 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 C1orf100Q5SVJ3 147 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 FKBP1CQ5VVH2 108 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF787Q6DD87 383 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 RPTNQ6XPR3 784 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 Q6ZN92 141 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 C19orf35Q6ZS72 473 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 SYT9Q86SS6 491 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 RBM45Q8IUH3 476 aaKnown RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 LINC00346Q8IVM7 164 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 CSNK1A1LQ8N752 337 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 LRTM2Q8N967 370 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 MRPL43Q8N983 215 aaKnown RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 STXBP6Q8NFX7 210 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 OR10S1Q8NGN2 331 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 OR2T10Q8NGZ9 312 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 FNDC9Q8TBE3 224 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 ASB10Q8WXI3 467 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 EMG1Q92979 244 aaKnown RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 POM121L2Q96KW2 1035 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 SLC46A1Q96NT5 459 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 SIGMAR1Q99720 223 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 HCAR1Q9BXC0 346 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 RAB11FIP5Q9BXF6 653 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 KLF16Q9BXK1 252 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 TMEM39BQ9GZU3 492 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 MAGEH1Q9H213 219 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 SYNPO2LQ9H987 977 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 SLC2A4RGQ9NR83 387 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 TMEM30AQ9NV96 361 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 PLEKHJ1Q9NW61 149 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 ABI3Q9P2A4 366 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 LAMP3Q9UQV4 416 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 TBL2Q9Y4P3 447 aaKnown RBP5.4□□□□□ -1.54
SNHG1-211ENST00000539921 PXMP4Q9Y6I8 212 aa5.4□□□□□ -1.54
SNHG1-211ENST00000539921 NUP210LQ5VU65 1888 aa5.4□□□□□ -1.55
SNHG1-211ENST00000539921 IGLV3-16A0A075B6K0 115 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 PIGBOS1A0A0B4J2F0 54 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 SMIM28A0A1B0GU29 152 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF320A2RRD8 509 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 ANKRD66B4E2M5 251 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 M0QYG6 137 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 HS3ST1O14792 307 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 ARPC3O15145 178 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 CD5LO43866 347 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 GDF9O60383 454 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 KBTBD11O94819 623 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 SLC25A14O95258 325 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-211ENST00000539921 SLC2A10O95528 541 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 EPPINO95925 133 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 CH25HO95992 272 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 KLKB1P03952 638 aa5.39□□□□□ -1.55
SNHG1-211ENST00000539921 NGFRP08138 427 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms