RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 HES4Q9HCC6 221 aa12.9□□□□□ -0.34
CIT-210ENST00000539413 INPP5EQ9NRR6 644 aa12.9□□□□□ -0.34
CIT-210ENST00000539413 IGHV1-69DA0A0B4J2H0 117 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 IGKV1-9A0A0C4DH69 117 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 TMEM89A2RUT3 159 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 E9PI62 339 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 F8VVB4 439 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 F8VWA3 439 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 INMTO95050 263 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 IGHV1-69P01742 117 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 PRDX2P32119 198 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 DLX1P56177 255 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 ERVK11-1P61568 191 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 PRB3Q04118 309 aaPredicted RBP12.89□□□□□ -0.35
CIT-210ENST00000539413 CNN3Q15417 329 aaKnown RBP12.89□□□□□ -0.35
CIT-210ENST00000539413 SLC9A3R2Q15599 337 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 KLHL22Q53GT1 634 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 KIR3DL3Q8N743 410 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 PACRGLQ8N7B6 248 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 Q8N7P7 452 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 ZNF676Q8N7Q3 588 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 CNIH3Q8TBE1 160 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 CYGBQ8WWM9 190 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 GATAD2BQ8WXI9 593 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 BORCS8Q96FH0 119 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 DMRTB1Q96MA1 342 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 MYCBPQ99417 103 aaPredicted RBP12.89□□□□□ -0.35
CIT-210ENST00000539413 FGF20Q9NP95 211 aaPredicted RBP12.89□□□□□ -0.35
CIT-210ENST00000539413 SIRT7Q9NRC8 400 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 MTCH1Q9NZJ7 389 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 HHLA2Q9UM44 414 aa12.89□□□□□ -0.35
CIT-210ENST00000539413 A0A1W2PQ09 198 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 LIMS3P0CW19 117 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 LIMS4P0CW20 117 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 ZNF20P17024 532 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 CAPZA1P52907 286 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 ADARB1P78563 741 aaKnown RBP12.88□□□□□ -0.35
CIT-210ENST00000539413 TTC23Q5W5X9 447 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 C12orf54Q6X4T0 127 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 CMTM4Q8IZR5 234 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 OR13C3Q8NGS6 347 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 GCDHQ92947 438 aaPredicted RBP12.88□□□□□ -0.35
CIT-210ENST00000539413 ZDHHC16Q969W1 377 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 SLAMF9Q96A28 289 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 PRDM13Q9H4Q3 707 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 C8orf4Q9NR00 106 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 OR14J1Q9UGF5 321 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 DOCK11Q5JSL3 2073 aa12.88□□□□□ -0.35
CIT-210ENST00000539413 SLC1A7O00341 560 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 HOXA3O43365 443 aaPredicted RBP12.87□□□□□ -0.35
CIT-210ENST00000539413 RNASE1P07998 156 aaKnown RBP12.87□□□□□ -0.35
CIT-210ENST00000539413 ATF1P18846 271 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 AZGP1P25311 298 aaKnown RBP12.87□□□□□ -0.35
CIT-210ENST00000539413 RBP2P50120 134 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 SLC25A26Q70HW3 274 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 EGFL6Q8IUX8 553 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 ZNF561Q8N587 486 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 DHRSXQ8N5I4 330 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 DNAAF1Q8NEP3 725 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 CEP19Q96LK0 163 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 JAM3Q9BX67 310 aa12.87□□□□□ -0.35
CIT-210ENST00000539413 ZMAT3Q9HA38 289 aaKnown RBP12.87□□□□□ -0.35
CIT-210ENST00000539413 RNASEK-C17orf49H0YIS7 233 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 CLDN34H7C241 214 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 ZFPL1O95159 310 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 KNG1P01042 644 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 COMPP49747 757 aaPredicted RBP12.86□□□□□ -0.35
CIT-210ENST00000539413 ETV1P50549 477 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 GTF2A1P52655 376 aaPredicted RBP12.86□□□□□ -0.35
CIT-210ENST00000539413 GBX2P52951 348 aaPredicted RBP12.86□□□□□ -0.35
CIT-210ENST00000539413 ATP1B3P54709 279 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 MRPL28Q13084 256 aaKnown RBP12.86□□□□□ -0.35
CIT-210ENST00000539413 KLRD1Q13241 179 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 OGFRL1Q5TC84 451 aaPredicted RBP12.86□□□□□ -0.35
CIT-210ENST00000539413 Q6YL49 198 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 FAM185AQ8N0U4 392 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 SETD9Q8NE22 299 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 OR13C9Q8NGT0 318 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 SLC25A28Q96A46 364 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 OPALINQ96PE5 141 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 PDCD1LG2Q9BQ51 273 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 C19orf12Q9NSK7 152 aa12.86□□□□□ -0.35
CIT-210ENST00000539413 TRBV23-1A0A0A0MS06 115 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 A0A0U1RQK1 487 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 M0R1W7 72 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 CASQ2O14958 399 aaPredicted RBP12.85□□□□□ -0.35
CIT-210ENST00000539413 MELTFP08582 738 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 CCDC159P0C7I6 412 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 HKR1P10072 659 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 PRKACBP22694 351 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 NPBWR2P48146 333 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 POU3F4P49335 361 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 MTCP1P56278 107 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 COL10A1Q03692 680 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 OR2G6Q5TZ20 316 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 XAF1Q6GPH4 301 aa12.85□□□□□ -0.35
CIT-210ENST00000539413 METAP1DQ6UB28 335 aaPredicted RBP12.85□□□□□ -0.35
CIT-210ENST00000539413 LHFPL2Q6ZUX7 228 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms