RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SUB1P53999 127 aaKnown RBP eCLIP12.91□□□□□ -0.34
CACNB1-206ENST00000539338 UBE2G1P62253 170 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 MIDNQ504T8 468 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 BPIFCQ8NFQ6 507 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 OR13D1Q8NGV5 346 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 DDA1Q9BW61 102 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 FSCN3Q9NQT6 498 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 COX5AP20674 150 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 CSF2RBP32927 897 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 OR5M9Q8NGP3 310 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 OR10AC1Q8NH08 325 aa12.91□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF331Q9NQX6 463 aaPredicted RBP12.91□□□□□ -0.34
CACNB1-206ENST00000539338 MED19A0JLT2 244 aaPredicted RBP12.9□□□□□ -0.34
CACNB1-206ENST00000539338 DVL1O14640 695 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 RRASP10301 218 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 DVL1P1P54792 670 aaPredicted RBP12.9□□□□□ -0.34
CACNB1-206ENST00000539338 UBE2G2P60604 165 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 SMIM15Q7Z3B0 74 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 GALMQ96C23 342 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 RAB1BQ9H0U4 201 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 OR7C2O60412 319 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 OR5G3P0C626 314 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 OR2T2Q6IF00 324 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 ATG4DQ86TL0 474 aaPredicted RBP12.9□□□□□ -0.34
CACNB1-206ENST00000539338 CLRN3Q8NCR9 226 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 UBE2L5PA0A1B0GUS4 154 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 PLA2G10O15496 165 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 S1PR3Q99500 378 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 AQP7P3A6NL99 342 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 SPINT1O43278 529 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 MPC2O95563 127 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 KRASP01116 189 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 CD3EP07766 207 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 CCL2P13500 99 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 LRRC3BQ96PB8 259 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 SOX7Q9BT81 388 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 OR51I2Q9H344 312 aa12.9□□□□□ -0.34
CACNB1-206ENST00000539338 CENPVL1A0A0U1RR11 272 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 CYR61O00622 381 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 FGF7P21781 194 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 MESP2Q0VG99 397 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 ZNF79Q15937 498 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 RTL8BQ17RB0 113 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 PHYHD1Q5SRE7 291 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 WDR74Q6RFH5 385 aaPredicted RBP12.89□□□□□ -0.35
CACNB1-206ENST00000539338 ADGRG7Q96K78 797 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 RAB18Q9NP72 206 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 SLC25A4P12235 298 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 ZFP36L2P47974 494 aaKnown RBP12.89□□□□□ -0.35
CACNB1-206ENST00000539338 IFITM3Q01628 133 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 CLDN23Q96B33 292 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 SARGQ9BW04 601 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 PRR13Q9NZ81 148 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 GPR37O15354 613 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 SCAND1P57086 179 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 CFHR1Q03591 330 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 PABPC1L2AQ5JQF8 200 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 OR10V1Q8NGI7 309 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 MRPS24Q96EL2 167 aaKnown RBP12.89□□□□□ -0.35
CACNB1-206ENST00000539338 TECTBQ96PL2 329 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 NARFLQ9H6Q4 476 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 A0A1W2PPQ1 181 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 MOSPD3O75425 235 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 CST4P01036 141 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 DTYMKP23919 212 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 MEOX1P50221 254 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 RAC1P63000 192 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 ENDOGQ14249 297 aaKnown RBP12.89□□□□□ -0.35
CACNB1-206ENST00000539338 GUK1Q16774 197 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 PLAC9Q5JTB6 97 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 CIB3Q96Q77 187 aaPredicted RBP12.89□□□□□ -0.35
CACNB1-206ENST00000539338 C12orf57Q99622 126 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 CHST6Q9GZX3 395 aa12.89□□□□□ -0.35
CACNB1-206ENST00000539338 ZFC3H1O60293 1989 aaKnown RBP12.89□□□□□ -0.35
CACNB1-206ENST00000539338 TO15178 435 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 PEBP1P30086 187 aaKnown RBP12.88□□□□□ -0.35
CACNB1-206ENST00000539338 TMEM267Q0VDI3 215 aaPredicted RBP12.88□□□□□ -0.35
CACNB1-206ENST00000539338 NCR3LG1Q68D85 454 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 TMEM91Q6ZNR0 172 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 FAM58AQ8N1B3 248 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 TMEM52Q8NDY8 209 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 COMMD5Q9GZQ3 224 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 C12orf10Q9HB07 376 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
CACNB1-206ENST00000539338 ANKRD31Q8N7Z5 1873 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
CACNB1-206ENST00000539338 ADAM20O43506 726 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 CA6P23280 308 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 GALNSP34059 522 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 SMIM21Q3B7S5 101 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 SEZ6L2Q6UXD5 910 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 SPRED2Q7Z698 418 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 TSEN54Q7Z6J9 526 aaKnown RBP12.88□□□□□ -0.35
CACNB1-206ENST00000539338 ASB10Q8WXI3 467 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 UBTD1Q9HAC8 227 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 ADAP1O75689 374 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 MBP02144 154 aa12.88□□□□□ -0.35
CACNB1-206ENST00000539338 GNG3P63215 75 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms