RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ACSM4P0C7M7 580 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 MDKP21741 143 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 COX7A1P24310 79 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 IL12BP29460 328 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 VDAC2P45880 294 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 DIO3P55073 304 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 STXBP1P61764 594 aaKnown RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 BNIP2Q12982 314 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TFDP2Q14188 446 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR4D1Q15615 310 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SLC36A2Q495M3 483 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 LRRC10Q5BKY1 277 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SYT6Q5T7P8 510 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CNIH2Q6PI25 160 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CEMP1Q6PRD7 247 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 C12orf54Q6X4T0 127 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 NTM-AS1Q6ZSK4 140 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PID1Q7Z2X4 250 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 LINC01551Q86U37 167 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF429Q86V71 674 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 P2RY8Q86VZ1 359 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CYP4Z1Q86W10 505 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SPICQ8N5J4 248 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM252Q8N6L7 170 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ST20-AS1Q8NBB2 130 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 GPR32P1Q8NGA4 272 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR4F15Q8NGB8 312 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR51L1Q8NGJ5 315 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR9G1Q8NH87 305 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CDC26Q8NHZ8 85 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SFXN5Q8TD22 340 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 BAALCQ8WXS3 180 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR5P2Q8WZ92 322 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR5P3Q8WZ94 311 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 DOK1Q99704 481 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CIB1Q99828 191 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SFXN3Q9BWM7 321 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 HDHD2Q9H0R4 259 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 FKBP14Q9NWM8 211 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CD274Q9NZQ7 290 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PITPNC1Q9UKF7 332 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TRAPPC4Q9Y296 219 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TP53TG5Q9Y2B4 290 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TBL2Q9Y4P3 447 aaKnown RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 MMACHCQ9Y4U1 282 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 WSB1Q9Y6I7 421 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 V9GY05 133 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CCDC88CQ9P219 2028 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 GPR179Q6PRD1 2367 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 RIMS2Q9UQ26 1411 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ATP10BO94823 1461 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SUPT6HQ7KZ85 1726 aaKnown RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PTPRBP23467 1997 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PLAC8L1A1L4L8 177 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PGPA6NDG6 321 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR6C70A6NIJ9 312 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SUPT3HB4E1H0 165 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM238C9JI98 176 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 H3BQV1 296 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 GABRPO00591 440 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 FLOT1O75955 427 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SUPT7LO94864 414 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 NDUFB2O95178 105 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TTC4O95801 387 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CLIC3O95833 236 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 IGLV2-23P01705 113 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV4-34P06331 123 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 GKN3PP0CG01 181 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ABOP16442 354 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 TNNI1P19237 187 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CSNK2A2P19784 350 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 KDELR2P33947 212 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 EPHX2P34913 555 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 HCCSP53701 268 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 UBE2G2P60604 165 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CXCR4P61073 352 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 VSNL1P62760 191 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 MXD1Q05195 221 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SMARCB1Q12824 385 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 RCN1Q15293 331 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 GPR157Q5UAW9 335 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 UNQ9165/PRO28630Q6UXU0 137 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 FBXW12Q6X9E4 464 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 Q6ZVH6 145 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SLC16A14Q7RTX9 510 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 LYG2Q86SG7 212 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 LINC00337Q8N6G1 96 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 INO80EQ8NBZ0 244 aaPredicted RBP0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF485Q8NCK3 441 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR51Q1Q8NH59 317 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 CXorf40AQ8TE69 158 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ASZ1Q8WWH4 475 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PPP1R14BQ96C90 147 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 C16orf74Q96GX8 76 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 BIRC8Q96P09 236 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 ALS2CR12Q96Q35 445 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 OR2A5Q96R48 311 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 SIKE1Q9BRV8 207 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 HES7Q9BYE0 225 aa0.67□□□□□ -2.3
HIF1A-204ENST00000539097 PRRG3Q9BZD7 231 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms