RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 BTN1A1Q13410 526 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 PDCD1Q15116 288 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 CDCP2Q5VXM1 449 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 TMEM42Q69YG0 159 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 BATF2Q8N1L9 274 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 EIF4E3Q8N5X7 224 aaKnown RBP21.6■■□□□ 1.05
RAB40C-204ENST00000538492 OR51F2Q8NH61 342 aa21.6■■□□□ 1.05
RAB40C-204ENST00000538492 CPNE2Q96FN4 548 aaPredicted RBP21.6■■□□□ 1.05
RAB40C-204ENST00000538492 TEX13DA0A0J9YY54 714 aaPredicted RBP21.59■■□□□ 1.05
RAB40C-204ENST00000538492 A0A1B0GW55 424 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 SIGLEC5O15389 551 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 DUX4L2P0CJ85 424 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 DUX4L3P0CJ86 424 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 DUX4L4P0CJ87 422 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 DUX4L5P0CJ88 424 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 DUX4L6P0CJ89 424 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 DUX4L7P0CJ90 424 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 EDN3P14138 238 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 PPIAP62937 165 aaKnown RBP21.59■■□□□ 1.05
RAB40C-204ENST00000538492 CMSS1Q9BQ75 279 aaKnown RBP21.59■■□□□ 1.05
RAB40C-204ENST00000538492 DDA1Q9BW61 102 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 SHARPINQ9H0F6 387 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 DUX4Q9UBX2 424 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 ZNF407Q9C0G0 2248 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 FAM166BA8MTA8 275 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 SFTPBP07988 381 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 MMP7P09237 267 aaPredicted RBP21.59■■□□□ 1.05
RAB40C-204ENST00000538492 RAB32Q13637 225 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 SURF2Q15527 256 aaPredicted RBP21.59■■□□□ 1.05
RAB40C-204ENST00000538492 ABHD17BQ5VST6 288 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 PLCXD3Q63HM9 321 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 FBXL14Q8N1E6 418 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 LIME1Q9H400 295 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 PLA2G3Q9NZ20 509 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 DNAJC13O75165 2243 aa21.59■■□□□ 1.05
RAB40C-204ENST00000538492 A0A096LPE4 126 aa21.58■■□□□ 1.05
RAB40C-204ENST00000538492 A0A1W2PPZ6 126 aa21.58■■□□□ 1.05
RAB40C-204ENST00000538492 FARS2O95363 451 aaKnown RBP21.58■■□□□ 1.05
RAB40C-204ENST00000538492 ZNF883P0CG24 379 aa21.58■■□□□ 1.05
RAB40C-204ENST00000538492 OR5H8P0DN80 308 aa21.58■■□□□ 1.05
RAB40C-204ENST00000538492 OR10AD1Q8NGE0 317 aa21.58■■□□□ 1.05
RAB40C-204ENST00000538492 ZNF703Q9H7S9 590 aaPredicted RBP21.58■■□□□ 1.05
RAB40C-204ENST00000538492 SLC7A10Q9NS82 523 aa21.58■■□□□ 1.05
RAB40C-204ENST00000538492 CCNOP22674 350 aa21.58■■□□□ 1.04
RAB40C-204ENST00000538492 PDSS1Q5T2R2 415 aa21.58■■□□□ 1.04
RAB40C-204ENST00000538492 FOXRED2Q8IWF2 684 aa21.58■■□□□ 1.04
RAB40C-204ENST00000538492 FAM173AQ9BQD7 235 aa21.58■■□□□ 1.04
RAB40C-204ENST00000538492 ZNF850A8MQ14 1090 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 IFNA2P01563 188 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 CHATP28329 748 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 S100A10P60903 97 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 PXDC1Q5TGL8 231 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 PRSS54Q6PEW0 395 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 LINC00696Q6ZRV3 163 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 C2orf50Q96LR7 162 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 MED13Q9UHV7 2174 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 ITGA3P26006 1051 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 LHX2P50458 406 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 OSR2Q8N2R0 312 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 RGCCQ9H4X1 137 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 HSF4Q9ULV5 492 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 SLC7A11Q9UPY5 501 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 ST3GAL6Q9Y274 331 aa21.57■■□□□ 1.04
RAB40C-204ENST00000538492 LOC105371267A0A1B0GV96 52 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 RRP8O43159 456 aaKnown RBP21.56■■□□□ 1.04
RAB40C-204ENST00000538492 FCGR3AP08637 254 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 CCL2P13500 99 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 MAGEA5P43359 124 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 ARF1P84077 181 aaKnown RBP21.56■■□□□ 1.04
RAB40C-204ENST00000538492 PDZK1IP1Q13113 114 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 TUSC5Q8IXB3 177 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 TOMM40LQ969M1 308 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 CALHM2Q9HA72 323 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 RYDENQ9NUL5 291 aaKnown RBP21.56■■□□□ 1.04
RAB40C-204ENST00000538492 ZNF391Q9UJN7 358 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 BDP1A6H8Y1 2624 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 APOC3P02656 99 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 RBMXP38159 391 aaKnown RBP21.56■■□□□ 1.04
RAB40C-204ENST00000538492 POC1AQ8NBT0 407 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 SLC6A15Q9H2J7 730 aa21.56■■□□□ 1.04
RAB40C-204ENST00000538492 FUT6P51993 359 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 OR1C1Q15619 314 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 OR8B8Q15620 311 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 ASCL4Q6XD76 172 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 CYTL1Q9NRR1 136 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 EDARQ9UNE0 448 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 F8VVB4 439 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 F8VWA3 439 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 TERTO14746 1132 aaKnown RBP21.55■■□□□ 1.04
RAB40C-204ENST00000538492 TPT1P13693 172 aaKnown RBP21.55■■□□□ 1.04
RAB40C-204ENST00000538492 FOXG1P55316 489 aaPredicted RBP21.55■■□□□ 1.04
RAB40C-204ENST00000538492 CLDN18P56856 261 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 CALHM1Q8IU99 346 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 ZNF100Q8IYN0 542 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 TMEM45BQ96B21 275 aa21.55■■□□□ 1.04
RAB40C-204ENST00000538492 MARS2Q96GW9 593 aaKnown RBP21.55■■□□□ 1.04
RAB40C-204ENST00000538492 ZNF816-ZNF321PA0A0X1KG74 233 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 TSPAN4O14817 238 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 NSUN5P2Q63ZY6 315 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 TMEM200AQ86VY9 491 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms