RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ATP1A1-AS1Q5TC04 95 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 PLCXD3Q63HM9 321 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 ST8SIA2Q92186 375 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 MRPS24Q96EL2 167 aaKnown RBP12.12□□□□□ -0.47
LIMK1-208ENST00000538333 SULT4A1Q9BR01 284 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 RAB18Q9NP72 206 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 ACKR4Q9NPB9 350 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 MBD2Q9UBB5 411 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 ANXA10Q9UJ72 324 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 EDARQ9UNE0 448 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 SLC7A11Q9UPY5 501 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 LIPGQ9Y5X9 500 aa12.12□□□□□ -0.47
LIMK1-208ENST00000538333 TRBV6-7A0A0A0MS04 114 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 C5orf51A6NDU8 294 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 MFSD2BA6NFX1 497 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 POM121CA8CG34 1229 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 KLRC4-KLRK1H3BQV0 150 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 GEMIN2O14893 280 aaKnown RBP12.11□□□□□ -0.47
LIMK1-208ENST00000538333 BCL2L11O43521 198 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 COX5BP10606 129 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 DTYMKP23919 212 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 PPIAP62937 165 aaKnown RBP12.11□□□□□ -0.47
LIMK1-208ENST00000538333 ATXN7L3Q14CW9 347 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-208ENST00000538333 DAZAP2Q15038 168 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-208ENST00000538333 OSR2Q8N2R0 312 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 OR10AD1Q8NGE0 317 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 RBPMSQ93062 196 aaKnown RBP12.11□□□□□ -0.47
LIMK1-208ENST00000538333 VRK1Q99986 396 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-208ENST00000538333 REPIN1Q9BWE0 567 aaKnown RBP12.11□□□□□ -0.47
LIMK1-208ENST00000538333 PRRG4Q9BZD6 226 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 CHMP1AQ9HD42 196 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-208ENST00000538333 PRR13Q9NZ81 148 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 ADAP1O75689 374 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 PSMB6P28072 239 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 RNPS1Q15287 305 aaKnown RBP12.11□□□□□ -0.47
LIMK1-208ENST00000538333 CALHM1Q8IU99 346 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 THAP6Q8TBB0 222 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 APH1AQ96BI3 265 aa12.11□□□□□ -0.47
LIMK1-208ENST00000538333 C13orf42A0A1B0GVH6 325 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 KANTRA0A1W2PQU2 76 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 CDK2AP1O14519 115 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 SS18L1O75177 396 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-208ENST00000538333 ACTL6AO96019 429 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 FCGR3AP08637 254 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 ECI1P42126 302 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 CYCSP99999 105 aaKnown RBP12.1□□□□□ -0.47
LIMK1-208ENST00000538333 SPEM2Q0P670 501 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 TRIP6Q15654 476 aaKnown RBP12.1□□□□□ -0.47
LIMK1-208ENST00000538333 NUFIP2Q7Z417 695 aaKnown RBP12.1□□□□□ -0.47
LIMK1-208ENST00000538333 OR1S1Q8NH92 325 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
LIMK1-208ENST00000538333 ZNF2Q9BSG1 426 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-208ENST00000538333 RNF126Q9BV68 326 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 LIME1Q9H400 295 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 ST3GAL6Q9Y274 331 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 CACNA1HO95180 2353 aa12.1□□□□□ -0.47
LIMK1-208ENST00000538333 ZNF850A8MQ14 1090 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 MPTX1A8MV57 137 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 CCL2P13500 99 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 PTGER4P35408 488 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 RRADP55042 308 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 ARPC4P59998 168 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 SLC10A1Q14973 349 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 BEX5Q5H9J7 111 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-208ENST00000538333 NAXEQ8NCW5 288 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 Q8NFD4 153 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 OR56B2PQ8NGI1 322 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 OR51F2Q8NH61 342 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 C1QTNF6Q9BXI9 259 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 FGF23Q9GZV9 251 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-208ENST00000538333 CRIM1Q9NZV1 1036 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 GPR160Q9UJ42 338 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 KCNMB2Q9Y691 235 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 DOCK7Q96N67 2140 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 C5orf49A4QMS7 147 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 H0YIZ8 118 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 ZNHIT1O43257 154 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 CD46P15529 392 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 OPRM1P35372 400 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 RBM11P57052 281 aaKnown RBP12.09□□□□□ -0.47
LIMK1-208ENST00000538333 TGIF1Q15583 401 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 RNFT1Q5M7Z0 435 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 GLRX5Q86SX6 157 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 ZNF611Q8N823 705 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 DYRK2Q92630 601 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 CSAG2Q9Y5P2 127 aa12.09□□□□□ -0.47
LIMK1-208ENST00000538333 ZNF318Q5VUA4 2279 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 ARGFXA6NJG6 315 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 CTSDP07339 412 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-208ENST00000538333 OR5H8P0DN80 308 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 PGAM2P15259 253 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 CCNOP22674 350 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 LUMP51884 338 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-208ENST00000538333 SOX8P57073 446 aa12.08□□□□□ -0.48
LIMK1-208ENST00000538333 IL15RAQ13261 267 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms