RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 KCTD14Q9BQ13 255 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-207ENST00000537965 MMP28Q9H239 520 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 EFCAB1Q9HAE3 211 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 SAR1AQ9NR31 198 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 SERTAD4Q9NUC0 356 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 MRPS18AQ9NVS2 196 aaKnown RBP4.3□□□□□ -1.72
SNHG1-207ENST00000537965 MRPL22Q9NWU5 206 aaKnown RBP4.3□□□□□ -1.72
SNHG1-207ENST00000537965 RASL12Q9NYN1 266 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 USE1Q9NZ43 259 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 NDUFAF4Q9P032 175 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 NLKQ9UBE8 527 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 BAIAP2Q9UQB8 552 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 TBL2Q9Y4P3 447 aaKnown RBP4.3□□□□□ -1.72
SNHG1-207ENST00000537965 TRBV4-1A0A0J9YWV2 114 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 hCG_38984A0A1B0GV85 526 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 A0A1B0GW55 424 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 SLC1A7O00341 560 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 AKR7A2O43488 359 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 KRT36O76013 467 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 CST4P01036 141 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 IFNGP01579 166 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 SPARCP09486 303 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 NHLRC4P0CG21 123 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DUX4L2P0CJ85 424 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DUX4L3P0CJ86 424 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DUX4L4P0CJ87 422 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DUX4L5P0CJ88 424 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DUX4L6P0CJ89 424 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DUX4L7P0CJ90 424 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 CD28P10747 220 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 SLC2A1P11166 492 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 AZGP1P25311 298 aaKnown RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 RRM2P31350 389 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 PYCR1P32322 319 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 VDAC2P45880 294 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 GSSP48637 474 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 CX3CR1P49238 355 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 ARHGDIBP52566 201 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 CAPZA1P52907 286 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 SLC25A1P53007 311 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 OR12D2P58182 307 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 RPL31P62899 125 aaKnown RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 GNG3P63215 75 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 CSNK2BP67870 215 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 HOXA4Q00056 320 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 TSPAN31Q12999 210 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DGUOKQ16854 277 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 LCN1P1Q5VSP4 162 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 GLYATQ6IB77 296 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DUX4L9Q6RFH8 374 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 HACD2Q6Y1H2 254 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 C16orf82Q7Z2V1 217 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 CENPVQ7Z7K6 275 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 FAM185AQ8N0U4 392 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 FGFRL1Q8N441 504 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 PNKDQ8N490 385 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 ZNF561Q8N587 486 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 TMEM185AQ8NFB2 350 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 OR13D1Q8NGV5 346 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 OR52J3Q8NH60 311 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 CAPSLQ8WWF8 208 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 OR5P3Q8WZ94 311 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 RORBQ92753 470 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 SGK3Q96BR1 496 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 RCN3Q96D15 328 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 PGAM5Q96HS1 289 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 PYURFQ96I23 114 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 C7orf34Q96L11 122 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 GAFA1Q96PS6 74 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DDOQ99489 341 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 CITED2Q99967 270 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 MCRIP2Q9BUT9 160 aaKnown RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 TINAGL1Q9GZM7 467 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 C1orf21Q9H246 121 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 FN3KQ9H479 309 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 NIPAL2Q9H841 368 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 ZNF702PQ9H963 129 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 VIPAS39Q9H9C1 493 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 SNTG1Q9NSN8 517 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DCAF13Q9NV06 445 aaKnown RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 CMTM6Q9NX76 183 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DUX4Q9UBX2 424 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 TCF19Q9Y242 345 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 RHBDD3Q9Y3P4 386 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 TSSC4Q9Y5U2 329 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-207ENST00000537965 COMMD3-BMI1R4GMX3 469 aa4.29□□□□□ -1.72
SNHG1-207ENST00000537965 DHRS12A0PJE2 317 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 TVP23AA6NH52 213 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 FAM90A8PA6NJQ4 464 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 ACOD1A6NK06 481 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 OR5B21A6NL26 309 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 ZNF850A8MQ14 1090 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 K7EIL1 84 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 CCDC22O60826 627 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 RHBDL1O75783 438 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 RBP4P02753 201 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 CHRM2P08172 466 aa4.28□□□□□ -1.72
SNHG1-207ENST00000537965 H2BFMP0C1H6 154 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms