RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SMURF1Q9HCE7 757 aa20.4■□□□□ 0.86
HMGA2-208ENST00000537429 MYOZ1Q9NP98 299 aaPredicted RBP20.4■□□□□ 0.86
HMGA2-208ENST00000537429 NPBWR2P48146 333 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 ERVK11-1P61568 191 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 HOXA4Q00056 320 aaPredicted RBP20.39■□□□□ 0.85
HMGA2-208ENST00000537429 HES5Q5TA89 166 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 AWAT2Q6E213 333 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 C1orf87Q8N0U7 546 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 CEP19Q96LK0 163 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 C1orf147Q96MC9 270 aaPredicted RBP20.39■□□□□ 0.85
HMGA2-208ENST00000537429 ZNF488Q96MN9 340 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 NRIP2Q9BQI9 281 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 CHODLQ9H9P2 273 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 ING4Q9UNL4 249 aa20.39■□□□□ 0.85
HMGA2-208ENST00000537429 PDZD2O15018 2839 aa20.38■□□□□ 0.85
HMGA2-208ENST00000537429 KDM4BO94953 1096 aa20.38■□□□□ 0.85
HMGA2-208ENST00000537429 GLIPR1L1Q6UWM5 242 aa20.38■□□□□ 0.85
HMGA2-208ENST00000537429 ZNF525Q8N782 197 aa20.38■□□□□ 0.85
HMGA2-208ENST00000537429 TBC1D15Q8TC07 691 aa20.38■□□□□ 0.85
HMGA2-208ENST00000537429 GHRLQ9UBU3 117 aa20.38■□□□□ 0.85
HMGA2-208ENST00000537429 STEAP1Q9UHE8 339 aa20.38■□□□□ 0.85
HMGA2-208ENST00000537429 F8VVB4 439 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 F8VWA3 439 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 TRAPPC2LH3BP13 241 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 SFTPBP07988 381 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 SLC2A2P11168 524 aaPredicted RBP20.37■□□□□ 0.85
HMGA2-208ENST00000537429 EGR1P18146 543 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 BCL3P20749 454 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 RAB11BQ15907 218 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 CROCCP3Q8IVE0 287 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 BOLLQ8N9W6 283 aaKnown RBP20.37■□□□□ 0.85
HMGA2-208ENST00000537429 S100A13Q99584 98 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 BARHL1Q9BZE3 327 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 WDR13Q9H1Z4 485 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 HES4Q9HCC6 221 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 IL36GQ9NZH8 169 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 DAPK2Q9UIK4 370 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 NPTNQ9Y639 398 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 C3orf80F5H4A9 247 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.37■□□□□ 0.85
HMGA2-208ENST00000537429 WNT9BO14905 357 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 CLDN12P56749 244 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 TMEM33P57088 247 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 GMFBP60983 142 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 FAM201AQ5SY85 155 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 Q8IYB0 196 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 BATF2Q8N1L9 274 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 Q8NFD4 153 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 METTL9Q9H1A3 318 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 ELL3Q9HB65 397 aaPredicted RBP20.37■□□□□ 0.85
HMGA2-208ENST00000537429 RHOFQ9HBH0 211 aa20.37■□□□□ 0.85
HMGA2-208ENST00000537429 CLDN25C9JDP6 229 aa20.36■□□□□ 0.85
HMGA2-208ENST00000537429 UBBP0CG47 229 aa20.36■□□□□ 0.85
HMGA2-208ENST00000537429 GLRA1P23415 457 aa20.36■□□□□ 0.85
HMGA2-208ENST00000537429 P2RY14Q15391 338 aa20.36■□□□□ 0.85
HMGA2-208ENST00000537429 RSU1Q15404 277 aa20.36■□□□□ 0.85
HMGA2-208ENST00000537429 DYNC2LI1Q8TCX1 351 aa20.36■□□□□ 0.85
HMGA2-208ENST00000537429 LIN7BQ9HAP6 207 aa20.36■□□□□ 0.85
HMGA2-208ENST00000537429 RBFOX1Q9NWB1 397 aaKnown RBP20.36■□□□□ 0.85
HMGA2-208ENST00000537429 RASL12Q9NYN1 266 aa20.36■□□□□ 0.85
HMGA2-208ENST00000537429 TMEM127O75204 238 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 ZNF780AO75290 641 aaPredicted RBP20.35■□□□□ 0.85
HMGA2-208ENST00000537429 ARSBP15848 533 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 RANBP1P43487 201 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 PDLIM4P50479 330 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 RORCP51449 518 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 GPR176Q14439 515 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 DGUOKQ16854 277 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 SLC22A6Q4U2R8 563 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 ELP2Q6IA86 826 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 CLEC2AQ6UVW9 174 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 OR51D1Q8NGF3 324 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 OR10K1Q8NGX5 313 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 FAM3DQ96BQ1 224 aa20.35■□□□□ 0.85
HMGA2-208ENST00000537429 PPIAL4EA0A075B759 164 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 PPIAL4DF5H284 164 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 PPIHO43447 177 aaKnown RBP20.34■□□□□ 0.85
HMGA2-208ENST00000537429 NXPH2O95156 264 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 ZNF205O95201 554 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 FSTL3O95633 263 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 BPNT1O95861 308 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 PPIAL4FP0DN26 164 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 C2orf76Q3KRA6 126 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 IDNKQ5T6J7 187 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 ACP7Q6ZNF0 438 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 DNM1P46Q6ZS02 220 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 PEG10Q86TG7 708 aaKnown RBP20.34■□□□□ 0.85
HMGA2-208ENST00000537429 SEH1LQ96EE3 360 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 PPIAL4AQ9Y536 164 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 CSMD1Q96PZ7 3565 aa20.34■□□□□ 0.85
HMGA2-208ENST00000537429 A0A0B4J203 849 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 A0A1W2PP11 408 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 CSTBP04080 98 aaKnown RBP20.33■□□□□ 0.85
HMGA2-208ENST00000537429 VSIG8P0DPA2 414 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 SERPINA2P20848 420 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 GIFP27352 417 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 CD80P33681 288 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 QRFPP83859 136 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 TEX36Q5VZQ5 186 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 SFRP4Q6FHJ7 346 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms