RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 C3P1Q6ZMU1 363 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 TMEM200AQ86VY9 491 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 OR5T2Q8NGG2 359 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 OR10K1Q8NGX5 313 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 MRGPRFQ96AM1 343 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 ST6GALNAC5Q9BVH7 336 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 DOCK10Q96BY6 2186 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 NCKAP5O14513 1909 aa11.76□□□□□ -0.53
SMG6-203ENST00000536871 ZNF250P15622 560 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 CXCL2P19875 107 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 VAMP1P23763 118 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 GABRR1P24046 479 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 FLI1Q01543 452 aaPredicted RBP11.75□□□□□ -0.53
SMG6-203ENST00000536871 MRPL49Q13405 166 aaKnown RBP11.75□□□□□ -0.53
SMG6-203ENST00000536871 ZNF273Q14593 569 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 LY6G6FQ5SQ64 297 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 TFAP2EQ6VUC0 442 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 OR1K1Q8NGR3 316 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 MARCH1Q8TCQ1 289 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 POM121L2Q96KW2 1035 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 HIST1H2AAQ96QV6 131 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 GSX2Q9BZM3 304 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 SHARPINQ9H0F6 387 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 DEFB127Q9H1M4 99 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 RHOFQ9HBH0 211 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 EHFQ9NZC4 300 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 C14orf166Q9Y224 244 aaKnown RBP11.75□□□□□ -0.53
SMG6-203ENST00000536871 OSGIN2Q9Y236 505 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 PRELID3BQ9Y3B1 194 aa11.75□□□□□ -0.53
SMG6-203ENST00000536871 LOC100509620A0A075B734 347 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 FXYD6-FXYD2A0A087WZ82 144 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 C5orf49A4QMS7 147 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 OR5H14A6NHG9 310 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 TSPAN4O14817 238 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 ARPC5O15511 151 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 SCO1O75880 301 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 OR2F2O95006 317 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 SIX6O95475 246 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 SFT2D2O95562 160 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 CD79AP11912 226 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 CHATP28329 748 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 SSTR2P30874 369 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 OR2F1Q13607 317 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 EXOSC2Q13868 293 aaKnown RBP11.74□□□□□ -0.53
SMG6-203ENST00000536871 TGIF1Q15583 401 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 C2orf68Q2NKX9 166 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 NHLRC3Q5JS37 347 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 DCAF12L2Q5VW00 463 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 ELP2Q6IA86 826 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 RPUSD3Q6P087 351 aaKnown RBP11.74□□□□□ -0.53
SMG6-203ENST00000536871 TMUB2Q71RG4 321 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 P4HA3Q7Z4N8 544 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 ZDHHC23Q8IYP9 409 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 OR5A2Q8NGI9 324 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 OR51F2Q8NH61 342 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 VRK1Q99986 396 aaPredicted RBP11.74□□□□□ -0.53
SMG6-203ENST00000536871 CMSS1Q9BQ75 279 aaKnown RBP11.74□□□□□ -0.53
SMG6-203ENST00000536871 FXYD6Q9H0Q3 95 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 PLK3Q9H4B4 646 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 RAB18Q9NP72 206 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 ZNF701Q9NV72 531 aaPredicted RBP11.74□□□□□ -0.53
SMG6-203ENST00000536871 NECAP2Q9NVZ3 263 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 ANXA10Q9UJ72 324 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 MPC1Q9Y5U8 109 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 MED12Q93074 2177 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 IGKV1-27A0A075B6S5 117 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 A0A096LPE4 126 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 A0A1W2PPZ6 126 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 PQLC2LA1A4F0 135 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 ZNF891A8MT65 544 aaPredicted RBP11.74□□□□□ -0.53
SMG6-203ENST00000536871 PDCD6O75340 191 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 HLA-HP01893 362 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 AKR1C4P17516 323 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 SRSF7Q16629 238 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMG6-203ENST00000536871 CEACAM21Q3KPI0 293 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 TMEM211Q6ICI0 200 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 GSG1LQ6UXU4 331 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 NUFIP2Q7Z417 695 aaKnown RBP11.74□□□□□ -0.53
SMG6-203ENST00000536871 LINC00596Q86U02 117 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 MKXQ8IYA7 352 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 OR6K3Q8NGY3 331 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 NMES1Q9C002 83 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 MFFQ9GZY8 342 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 DECR2Q9NUI1 292 aa11.74□□□□□ -0.53
SMG6-203ENST00000536871 GPR179Q6PRD1 2367 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 SPAARA0A1B0GVQ0 90 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 A0A1B0GW55 424 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 OR5B21A6NL26 309 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 AQP7O14520 342 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 SPRY1O43609 319 aaPredicted RBP11.73□□□□□ -0.53
SMG6-203ENST00000536871 B3GALNT1O75752 331 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 MPC2O95563 127 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 DUX4L2P0CJ85 424 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 DUX4L3P0CJ86 424 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 DUX4L4P0CJ87 422 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 DUX4L5P0CJ88 424 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 DUX4L6P0CJ89 424 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 DUX4L7P0CJ90 424 aa11.73□□□□□ -0.53
SMG6-203ENST00000536871 FOSL1P15407 271 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms