RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SDSLQ96GA7 329 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 DCTN5Q9BTE1 182 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 PKIBQ9C010 78 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 MS4A7Q9GZW8 240 aaPredicted RBP10.85□□□□□ -0.67
PRKDC-206ENST00000536429 CNTD2Q9H8S5 307 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 HES4Q9HCC6 221 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 RASL12Q9NYN1 266 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 MTCH1Q9NZJ7 389 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
PRKDC-206ENST00000536429 HHLA2Q9UM44 414 aa10.85□□□□□ -0.67
PRKDC-206ENST00000536429 SIRT4Q9Y6E7 314 aaPredicted RBP10.85□□□□□ -0.67
PRKDC-206ENST00000536429 CENPVL3A0A0U1RRI6 287 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 NXPH2O95156 264 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 ECDO95905 644 aaPredicted RBP10.84□□□□□ -0.67
PRKDC-206ENST00000536429 LALBAP00709 142 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 LIPFP07098 398 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 ZNF20P17024 532 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 NDUFB7P17568 137 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 ATF1P18846 271 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 PRDX2P32119 198 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 GBX2P52951 348 aaPredicted RBP10.84□□□□□ -0.67
PRKDC-206ENST00000536429 IL24Q13007 206 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 SMIM21Q3B7S5 101 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 METTL11BQ5VVY1 283 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 CRIP3Q6Q6R5 217 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 C9orf139Q6ZV77 190 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 SLC25A26Q70HW3 274 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 UTS2BQ765I0 119 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 PDZD9Q8IXQ8 264 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 Q8N7P7 452 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 TMEM185AQ8NFB2 350 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 OR13C9Q8NGT0 318 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 PP6455Q8WZ26 134 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 GGHQ92820 318 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 BORCS8Q96FH0 119 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 MRPL48Q96GC5 212 aaKnown RBP10.84□□□□□ -0.67
PRKDC-206ENST00000536429 MED30Q96HR3 178 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 SPACA5Q96QH8 159 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 DCLRE1BQ9H816 532 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 ONECUT1Q9UBC0 465 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 IL36RNQ9UBH0 155 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 POLDIP2Q9Y2S7 368 aa10.84□□□□□ -0.67
PRKDC-206ENST00000536429 H0YAE9 185 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 XPNPEP2O43895 674 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 SERPINA3P01011 423 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 CALCBP10092 127 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 AZGP1P25311 298 aaKnown RBP10.83□□□□□ -0.68
PRKDC-206ENST00000536429 DCKP27707 260 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 NPBWR2P48146 333 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 POU3F4P49335 361 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 UBA52P62987 128 aaKnown RBP10.83□□□□□ -0.68
PRKDC-206ENST00000536429 SLC34A1Q06495 639 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 DOC2BQ14184 412 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 CNN3Q15417 329 aaKnown RBP10.83□□□□□ -0.68
PRKDC-206ENST00000536429 DEFB112Q30KQ8 113 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 C11orf91Q3C1V1 193 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 ASPHD2Q6ICH7 369 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 VMO1Q7Z5L0 202 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 SETD9Q8NE22 299 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 OR5AK2Q8NH90 309 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 C8orf46Q8TAG6 207 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 FBLIM1Q8WUP2 373 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 TFAP2CQ92754 450 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 LHX4Q969G2 390 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 RFT1Q96AA3 541 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 SIRT7Q9NRC8 400 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 OR14J1Q9UGF5 321 aa10.83□□□□□ -0.68
PRKDC-206ENST00000536429 DIMT1Q9UNQ2 313 aaKnown RBP10.83□□□□□ -0.68
PRKDC-206ENST00000536429 TENM1Q9UKZ4 2725 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 IGKV1-12A0A0C4DH73 117 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 TRBV2A0A0J9YWF9 115 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 DNAJC9-AS1A6NH13 148 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 TMEM212A6NML5 194 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 SPRY1O43609 319 aaPredicted RBP10.82□□□□□ -0.68
PRKDC-206ENST00000536429 ANGPTL7O43827 346 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 IGKV1D-12P01611 117 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 CAPZA1P52907 286 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 MTCP1P56278 107 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 CAV3P56539 151 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 KLRD1Q13241 179 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 IL18R1Q13478 541 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 GPR157Q5UAW9 335 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 EGFL6Q8IUX8 553 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 C8orf59Q8N0T1 100 aaPredicted RBP10.82□□□□□ -0.68
PRKDC-206ENST00000536429 DNAAF1Q8NEP3 725 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 OR5D18Q8NGL1 313 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 RPS4Y2Q8TD47 263 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 GATAD2BQ8WXI9 593 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 TAF15Q92804 592 aaKnown RBP eCLIP10.82□□□□□ -0.68
PRKDC-206ENST00000536429 TMEM80Q96HE8 168 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 CEP19Q96LK0 163 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 C19orf12Q9NSK7 152 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 RBFOX1Q9NWB1 397 aaKnown RBP10.82□□□□□ -0.68
PRKDC-206ENST00000536429 CAB39Q9Y376 341 aaPredicted RBP10.82□□□□□ -0.68
PRKDC-206ENST00000536429 KPTNQ9Y664 436 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 HSPE1-MOB4S4R3N1 261 aa10.82□□□□□ -0.68
PRKDC-206ENST00000536429 IGHV1-69DA0A0B4J2H0 117 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 GPR37O15354 613 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 KNG1P01042 644 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 IGHV1-69P01742 117 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms