RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PLPP5Q8NEB5 264 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 TSPAN32Q96QS1 320 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 SEMA5BQ9P283 1151 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 U3KQA8 63 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 TRBV5-7A0A0A0MS05 114 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 OPN1LWP04000 364 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 OR4A8P0C604 315 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 SPOCK1Q08629 439 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 ANKRD37Q7Z713 158 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 UBALD2Q8IYN6 164 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 RNF128Q8TEB7 428 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 PILRBQ9UKJ0 227 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 SLC22A13Q9Y226 551 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 TMED7-TICAM2A0A0A6YYA0 188 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 TRBV11-1A0A0K0K1C0 115 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 SHISA8B8ZZ34 492 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 DVL1O14640 695 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 DFFBO76075 338 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 MBPP02686 304 aaPredicted RBP12.3□□□□□ -0.44
LIG1-203ENST00000536218 AMBPP02760 352 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
LIG1-203ENST00000536218 SLC6A8P48029 635 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 CLDN6P56747 220 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 SLC35A1P78382 337 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 MRPS11P82912 194 aaKnown RBP12.3□□□□□ -0.44
LIG1-203ENST00000536218 ANKRD55Q3KP44 614 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 DPY19L4Q7Z388 723 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 COMMD1Q8N668 190 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 SDK2Q58EX2 2172 aa12.3□□□□□ -0.44
LIG1-203ENST00000536218 GLO1Q04760 184 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 HAGHQ16775 308 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 TMEM128Q5BJH2 165 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 LINC01590Q5TEZ4 76 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 GALNTL5Q7Z4T8 443 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 C2orf50Q96LR7 162 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 WDR76Q9H967 626 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 SUSD2Q9UGT4 822 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 MRPS18BQ9Y676 258 aaKnown RBP12.29□□□□□ -0.44
LIG1-203ENST00000536218 LAMTOR5O43504 91 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 SAPCD1Q5SSQ6 148 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 FAHD2BQ6P2I3 314 aaPredicted RBP12.29□□□□□ -0.44
LIG1-203ENST00000536218 BTNL3Q6UXE8 466 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 C17orf78Q8N4C9 275 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 LRRC75AQ8NAA5 344 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 LYPD6BQ8NI32 183 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 RPS4Y2Q8TD47 263 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 GPR119Q8TDV5 335 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 FAHD2AQ96GK7 314 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 NMNAT2Q9BZQ4 307 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 SH3BGRL3Q9H299 93 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 MRPL22Q9NWU5 206 aaKnown RBP12.29□□□□□ -0.44
LIG1-203ENST00000536218 HSF4Q9ULV5 492 aa12.29□□□□□ -0.44
LIG1-203ENST00000536218 TMEM212A6NML5 194 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 CA11O75493 328 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 OR6A2O95222 327 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 OR3A1P47881 315 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 TOMM20Q15388 145 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 ERGIC1Q969X5 290 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 SLC26A1Q9H2B4 701 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 RAB18Q9NP72 206 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 TAS2R4Q9NYW5 299 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 CKLFQ9UBR5 152 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 OR5H8P0DN80 308 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 TAS2R31P59538 309 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 PAX5Q02548 391 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 HERPUD1Q15011 391 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 ZNF684Q5T5D7 378 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 RABEPKQ7Z6M1 372 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 ZNF429Q86V71 674 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 OR51A2Q8NGJ7 313 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 NEK7Q8TDX7 302 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 DIRC2Q96SL1 478 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 SLC17A5Q9NRA2 495 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 PITPNC1Q9UKF7 332 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 TRAV36DV7A0A075B6V5 113 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 TMEM269A0A1B0GVZ9 245 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 XKRYO14609 159 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 DANCRP0C864 163 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 GNB3P16520 340 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 IL11P20809 199 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 MSX1P28360 303 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 IAH1Q2TAA2 248 aaPredicted RBP12.28□□□□□ -0.44
LIG1-203ENST00000536218 AARDQ4LEZ3 155 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 WDR38Q5JTN6 314 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 DCAF10Q5QP82 559 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 OPN5Q6U736 354 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 TMEM182Q6ZP80 229 aaPredicted RBP12.28□□□□□ -0.44
LIG1-203ENST00000536218 ADGRE4PQ86SQ3 457 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 IFI44Q8TCB0 444 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 MCHR2Q969V1 340 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 PADI1Q9ULC6 663 aa12.28□□□□□ -0.44
LIG1-203ENST00000536218 ADAMTS9Q9P2N4 1935 aa12.27□□□□□ -0.44
LIG1-203ENST00000536218 HSPA12AO43301 675 aa12.27□□□□□ -0.44
LIG1-203ENST00000536218 RENP00797 406 aa12.27□□□□□ -0.44
LIG1-203ENST00000536218 LINC00614P0C842 121 aa12.27□□□□□ -0.44
LIG1-203ENST00000536218 FAM3AP98173 230 aa12.27□□□□□ -0.44
LIG1-203ENST00000536218 PEG10Q86TG7 708 aaKnown RBP12.27□□□□□ -0.44
LIG1-203ENST00000536218 FAM185AQ8N0U4 392 aa12.27□□□□□ -0.44
LIG1-203ENST00000536218 ZNF441Q8N8Z8 693 aa12.27□□□□□ -0.44
LIG1-203ENST00000536218 OR4K15Q8NH41 348 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms