RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 IGLV1-44P01699 117 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 ERCC1P07992 297 aaPredicted RBP6.91□□□□□ -1.3
COL21A1-212ENST00000535941 PPP3CBP16298 524 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 ABOP16442 354 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 ARF1P84077 181 aaKnown RBP6.91□□□□□ -1.3
COL21A1-212ENST00000535941 DEFB109BQ30KR1 87 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 CLEC2AQ6UVW9 174 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 FAM57BQ71RH2 274 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 LRRC18Q8N456 261 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 TMEM185AQ8NFB2 350 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 S100A16Q96FQ6 103 aaKnown RBP6.91□□□□□ -1.3
COL21A1-212ENST00000535941 LPAR5Q9H1C0 372 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 CENPMQ9NSP4 180 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 SLC2A8Q9NY64 477 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 ZNF69Q9UC07 566 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 RAB22AQ9UL26 194 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 ALPK2Q86TB3 2170 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 CST4P01036 141 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 MT-ND4P03905 459 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 UBBP0CG47 229 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 GDNFP39905 211 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 MOGAT2Q3SYC2 334 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 FAM76BQ5HYJ3 339 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 ETFRF1Q6IPR1 90 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 TMUB2Q71RG4 321 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.91□□□□□ -1.3
COL21A1-212ENST00000535941 GABRG1Q8N1C3 465 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 EIF4E3Q8N5X7 224 aaKnown RBP6.91□□□□□ -1.3
COL21A1-212ENST00000535941 OR6K3Q8NGY3 331 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 OR52I2Q8NH67 350 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 OR56B4Q8NH76 319 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 RNASE11Q8TAA1 199 aaKnown RBP6.91□□□□□ -1.3
COL21A1-212ENST00000535941 APH1AQ96BI3 265 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 ADAT1Q9BUB4 502 aaKnown RBP6.91□□□□□ -1.3
COL21A1-212ENST00000535941 MYOZ1Q9NP98 299 aaPredicted RBP6.91□□□□□ -1.3
COL21A1-212ENST00000535941 CDV3Q9UKY7 258 aaKnown RBP6.91□□□□□ -1.3
COL21A1-212ENST00000535941 FAM215AQ9Y5M1 114 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 NPTNQ9Y639 398 aa6.91□□□□□ -1.3
COL21A1-212ENST00000535941 ATMQ13315 3056 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 CEACAM18A8MTB9 384 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 XRCC2O43543 280 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 IGKV3-15P01624 115 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 MBP02144 154 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 HPXP02790 462 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 CRHP06850 196 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 IGHV1-2P23083 117 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 AKR1C2P52895 323 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 AKR1C1Q04828 323 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 PDZK1IP1Q13113 114 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 SNTB2Q13425 540 aaKnown RBP6.9□□□□□ -1.3
COL21A1-212ENST00000535941 ODF4Q2M2E3 257 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 RNF212Q495C1 297 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 Q6ZT83 130 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 PUSL1Q8N0Z8 303 aaKnown RBP6.9□□□□□ -1.3
COL21A1-212ENST00000535941 C9orf106Q8NAJ2 232 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 EDARADDQ8WWZ3 215 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 SEH1LQ96EE3 360 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 DEFB127Q9H1M4 99 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 HRASLSQ9HDD0 168 aa6.9□□□□□ -1.3
COL21A1-212ENST00000535941 CGGBP1Q9UFW8 167 aaPredicted RBP6.9□□□□□ -1.3
COL21A1-212ENST00000535941 C1orf196B1AJZ1 125 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 MCRIP1C9JLW8 97 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 MFNGO00587 321 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 SNAPC5O75971 98 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 SCGNO76038 276 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 IGHV2-70P01814 119 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 FBP1P09467 338 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 CEACAM8P31997 349 aaPredicted RBP6.9□□□□□ -1.31
COL21A1-212ENST00000535941 ARR3P36575 388 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 PMELP40967 661 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 WNT5AP41221 380 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 SEC61A1P61619 476 aaKnown RBP6.9□□□□□ -1.31
COL21A1-212ENST00000535941 GABRA6Q16445 453 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 OR2B11Q5JQS5 317 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 ABHD12BQ7Z5M8 362 aaPredicted RBP6.9□□□□□ -1.31
COL21A1-212ENST00000535941 LDLRAD3Q86YD5 345 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF433Q8N7K0 673 aaPredicted RBP6.9□□□□□ -1.31
COL21A1-212ENST00000535941 OR5M9Q8NGP3 310 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 MRGPRFQ96AM1 343 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 SPSB1Q96BD6 273 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 OR10A2Q9H208 303 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 POFUT1Q9H488 388 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 OPA3Q9H6K4 179 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 JKAMPQ9P055 326 aa6.9□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF729A6NN14 1252 aaPredicted RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 CDC14BO60729 498 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 H2AFB1P0C5Y9 115 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 GPX4P36969 197 aaPredicted RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 GNALP38405 381 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 GMFBP60983 142 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 RAP2BP61225 183 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 SFRP4Q6FHJ7 346 aaPredicted RBP6.89□□□□□ -1.31
COL21A1-212ENST00000535941 FAM214BQ7L5A3 538 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 SPACA3Q8IXA5 215 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 C17orf78Q8N4C9 275 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 ZNF283Q8N7M2 679 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 WDR31Q8NA23 367 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 TMEM229BQ8NBD8 167 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 REEP6Q96HR9 211 aa6.89□□□□□ -1.31
COL21A1-212ENST00000535941 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms