RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 ZNF581Q9P0T4 197 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 MCTS1Q9ULC4 181 aaKnown RBP11.6□□□□□ -0.55
VPS33B-202ENST00000535906 FAM186AA6NE01 2351 aa11.6□□□□□ -0.55
VPS33B-202ENST00000535906 C13orf42A0A1B0GVH6 325 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 SERPINE3A8MV23 424 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 HTR3BO95264 441 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 RBP2P50120 134 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 CNN3Q15417 329 aaKnown RBP11.59□□□□□ -0.55
VPS33B-202ENST00000535906 PAN3Q58A45 887 aaKnown RBP11.59□□□□□ -0.55
VPS33B-202ENST00000535906 PXDC1Q5TGL8 231 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 LHFPL1Q86WI0 220 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 TMEM17Q86X19 198 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 ARPC5LQ9BPX5 153 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 RGCCQ9H4X1 137 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 PARPBPQ9NWS1 579 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 ZNF391Q9UJN7 358 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 KLF13Q9Y2Y9 288 aaPredicted RBP11.59□□□□□ -0.55
VPS33B-202ENST00000535906 ZFHX4Q86UP3 3567 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 TRBV6-7A0A0A0MS04 114 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 A0A0B4J2A0 478 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 F5H0A9 414 aaPredicted RBP11.59□□□□□ -0.55
VPS33B-202ENST00000535906 SFT2D2O95562 160 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 PRKACBP22694 351 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 PPIAP62937 165 aaKnown RBP11.59□□□□□ -0.55
VPS33B-202ENST00000535906 BTN1A1Q13410 526 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 SNTB1Q13884 538 aaKnown RBP11.59□□□□□ -0.55
VPS33B-202ENST00000535906 RSU1Q15404 277 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 OR8B8Q15620 311 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 CLEC18BQ6UXF7 455 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 NAXEQ8NCW5 288 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 CSNK2A3Q8NEV1 391 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 BORCS8Q96FH0 119 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 C1QTNF5Q9BXJ0 243 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 PRRG4Q9BZD6 226 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 METTL9Q9H1A3 318 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 PLEKHJ1Q9NW61 149 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 SHPKQ9UHJ6 478 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 LIPGQ9Y5X9 500 aa11.59□□□□□ -0.55
VPS33B-202ENST00000535906 IGKV1D-8A0A087WSZ0 117 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF503-AS2A6NEH8 195 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 FIGNL2A6NMB9 653 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 KLRC4-KLRK1H3BQV0 150 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 RPL36A-HNRNPH2H7BZ11 118 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 HLA-HP01893 362 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 CSTBP04080 98 aaKnown RBP11.58□□□□□ -0.56
VPS33B-202ENST00000535906 PI3P19957 117 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 OR3A2P47893 321 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 TAS2R46P59540 309 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 TAF9Q16594 264 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 NKAPLQ5M9Q1 402 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 AADACL3Q5VUY0 350 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 TFAP2EQ6VUC0 442 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF100Q8IYN0 542 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 SUMF1Q8NBK3 374 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 OR13G1Q8NGZ3 307 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 RTBDNQ9BSG5 229 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-202ENST00000535906 HDHD3Q9BSH5 251 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-202ENST00000535906 BCO1Q9HAY6 547 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 RAB18Q9NP72 206 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 CSAG2Q9Y5P2 127 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 EP300Q09472 2414 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-202ENST00000535906 CFAP47Q6ZTR5 3102 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 IGKV1-12A0A0C4DH73 117 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 ARGFXA6NJG6 315 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 IGKV1D-12P01611 117 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 SERPINA5P05154 406 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 CCL2P13500 99 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 SUPT4H1P63272 117 aaKnown RBP11.58□□□□□ -0.56
VPS33B-202ENST00000535906 LHFPL2Q6ZUX7 228 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 OR5AP2Q8NGF4 316 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 PIGCQ92535 297 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 DOCK7Q96N67 2140 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 PRDM14Q9GZV8 571 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 LDAHQ9H6V9 325 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 ZNF701Q9NV72 531 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-202ENST00000535906 EHFQ9NZC4 300 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 OSGIN2Q9Y236 505 aa11.58□□□□□ -0.56
VPS33B-202ENST00000535906 PRRC2CQ9Y520 2896 aaKnown RBP11.58□□□□□ -0.56
VPS33B-202ENST00000535906 URB1O60287 2271 aaKnown RBP11.57□□□□□ -0.56
VPS33B-202ENST00000535906 DMXL1Q9Y485 3027 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 TEX13DA0A0J9YY54 714 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-202ENST00000535906 MSTNO14793 375 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 XRCC2O43543 280 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 PGAM2P15259 253 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 CCNOP22674 350 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 ARL6IP1Q15041 203 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 ASCL4Q6XD76 172 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 COLCA1Q6ZS62 124 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 ZFP62Q8NB50 900 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-202ENST00000535906 LHFPL5Q8TAF8 219 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 STOML3Q8TAV4 291 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 DCUN1D4Q92564 292 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 SPSB4Q96A44 273 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 FAAP24Q9BTP7 215 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 RNF126Q9BV68 326 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 MS4A7Q9GZW8 240 aaPredicted RBP11.57□□□□□ -0.56
VPS33B-202ENST00000535906 TAS2R3Q9NYW6 316 aa11.57□□□□□ -0.56
VPS33B-202ENST00000535906 OTOGLQ3ZCN5 2332 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms