RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 DYNAPQ8N1N2 210 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 IQCF1Q8N6M8 205 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 OR13D1Q8NGV5 346 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 RPS4Y2Q8TD47 263 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 CHID1Q9BWS9 393 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 PRSS22Q9GZN4 317 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 OR51V1Q9H2C8 321 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 BRD7Q9NPI1 651 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 GPR84Q9NQS5 396 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 LAMP5Q9UJQ1 280 aa9.03□□□□□ -0.96
CLSTN3-206ENST00000535668 DNAH9Q9NYC9 4486 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 A0A1W2PRD5 423 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 A0A1W2PRF3 423 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 A0A1W2PRM7 423 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 CCDC182A6NF36 153 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 PRR32B1ATL7 298 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 H3BN98 237 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 DUS4LO95620 317 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 TFF1P04155 84 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 CHRM2P08172 466 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 ERP29P30040 261 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 BNIP1Q12981 228 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 ZNF273Q14593 569 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 FAM189A2Q15884 450 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 ZNF684Q5T5D7 378 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 KCTD8Q6ZWB6 473 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 TMEM179BQ7Z7N9 219 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 FAM185AQ8N0U4 392 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 OR14K1Q8NGZ2 314 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 OR2T27Q8NH04 317 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 FAM81AQ8TBF8 368 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 OR51E1Q8TCB6 317 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 PHF21AQ96BD5 680 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 C10orf35Q96D05 121 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 TEX12Q9BXU0 123 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 ELL3Q9HB65 397 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 PIGLQ9Y2B2 252 aa9.02□□□□□ -0.97
CLSTN3-206ENST00000535668 B2RBV5 119 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 GSC2O15499 205 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 SYNGR1O43759 233 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 CST1P01037 141 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 T-ENOLP0DO92 83 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 IGHV1-8P0DP01 117 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 HAAOP46952 286 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 BMXP51813 675 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 RIDAP52758 137 aaKnown RBP9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 ACTR3P61158 418 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 EGFEM1PQ0D2K5 195 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 LY6EQ16553 131 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 OXLD1Q5BKU9 147 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 CEP78Q5JTW2 689 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 FAHD1Q6P587 224 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 ZBTB49Q6ZSB9 765 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 TCF23Q7RTU1 214 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 LHFPL4Q7Z7J7 247 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 OR8H2Q8N162 312 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 BBS1Q8NFJ9 593 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 MMP28Q9H239 520 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 AURKAIP1Q9NWT8 199 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 LINC00312Q9Y6C7 94 aa9.01□□□□□ -0.97
CLSTN3-206ENST00000535668 NXPH2O95156 264 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 CD28P10747 220 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 CCL3L1P16619 93 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 CALB2P22676 271 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 ESRRGP62508 458 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 BDH1Q02338 343 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 ZNF146Q15072 292 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 AADACL4Q5VUY2 407 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 PLCXD3Q63HM9 321 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 MOB3CQ70IA8 216 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 Q8IYB0 196 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 DNAAF1Q8NEP3 725 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 NSL1Q96IY1 281 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 SNX22Q96L94 193 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 CITED2Q99967 270 aaPredicted RBP9□□□□□ -0.97
CLSTN3-206ENST00000535668 ZNF556Q9HAH1 456 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 LIN7BQ9HAP6 207 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 RHOFQ9HBH0 211 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 SNX5Q9Y5X3 404 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 R4GMQ9 66 aa9□□□□□ -0.97
CLSTN3-206ENST00000535668 A0A087X0M5 115 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 A0A1B0GX30 115 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 hADV38S2A0JD32 116 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 H3BUI4 141 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 IGLV1-47P01700 117 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 VSIG10L2P0DP72 767 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 LMO1P25800 156 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 CD34P28906 385 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 SLC6A1P30531 599 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 CRISP1P54107 249 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 GMFBP60983 142 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 BLCAPP62952 87 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 APOFQ13790 326 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 FOXB2Q5VYV0 432 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 NXNL2Q5VZ03 156 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 ZNF322Q6U7Q0 402 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 MEPCEQ7L2J0 689 aaKnown RBP8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 C10orf67Q8IYJ2 551 aa8.99□□□□□ -0.97
CLSTN3-206ENST00000535668 ENTHD1Q8IYW4 607 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms