RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 A6NLC8 198 aa19.45■□□□□ 0.7
RBFOX1-206ENST00000535565 B9A039 149 aa19.45■□□□□ 0.7
RBFOX1-206ENST00000535565 PTH2RP49190 550 aa19.45■□□□□ 0.7
RBFOX1-206ENST00000535565 SRP9P49458 86 aaKnown RBP19.45■□□□□ 0.7
RBFOX1-206ENST00000535565 ELP2Q6IA86 826 aa19.45■□□□□ 0.7
RBFOX1-206ENST00000535565 SNX29P2Q8IUI4 249 aa19.45■□□□□ 0.7
RBFOX1-206ENST00000535565 Q8IYB0 196 aa19.45■□□□□ 0.7
RBFOX1-206ENST00000535565 TLNRD1Q9H1K6 362 aa19.45■□□□□ 0.7
RBFOX1-206ENST00000535565 MTCH1Q9NZJ7 389 aa19.45■□□□□ 0.7
RBFOX1-206ENST00000535565 RAB27BO00194 218 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 CDIPTO14735 213 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 CTDSPLO15194 276 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 UPK1BO75841 260 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 NPBWR2P48146 333 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 ZNF181Q2M3W8 571 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 MEX3BQ6ZN04 569 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 Q8NFD4 153 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 OR10R2Q8NGX6 335 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 LILRB1Q8NHL6 650 aaPredicted RBP19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 Q96M66 194 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 OR2V2Q96R30 315 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 NICN1Q9BSH3 213 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 ABCB10Q9NRK6 738 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 IGHV3-64DA0A0J9YX35 117 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 RHBDL1O75783 438 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 PTBP3O95758 552 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 IGHV1-46P01743 117 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 HLA-DQB1P01920 261 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 MRPS10P82664 201 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 TNFAIP6P98066 277 aaPredicted RBP19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 MOGAT2Q3SYC2 334 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 PRAMEF6Q5VXH4 476 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 FBXL14Q8N1E6 418 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 FAM89BQ8N5H3 189 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 CHST4Q8NCG5 386 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 MEGF10Q96KG7 1140 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 DYNLRB1Q9NP97 96 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 IL19Q9UHD0 177 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 ST3GAL6Q9Y274 331 aa19.44■□□□□ 0.7
RBFOX1-206ENST00000535565 MYO18BQ8IUG5 2567 aa19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 ICE1Q9Y2F5 2266 aa19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 CHD3Q12873 2000 aaKnown RBP19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 C17orf100A8MU93 164 aa19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 RNF224P0DH78 156 aa19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 FGF12P61328 243 aa19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 DAZAP2Q15038 168 aaPredicted RBP19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 MUC15Q8N387 334 aa19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 POM121Q96HA1 1249 aa19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 RBFOX1Q9NWB1 397 aaKnown RBP19.43■□□□□ 0.7
RBFOX1-206ENST00000535565 A0A0A6YYD4 124 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 AKR7A2O43488 359 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 ADH4P08319 380 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 ACAA1P09110 424 aaPredicted RBP19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 PGA5P0DJD9 388 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 RBM11P57052 281 aaKnown RBP19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 TRIQKQ629K1 86 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 BATF2Q8N1L9 274 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 FBXW5Q969U6 566 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 RAB3CQ96E17 227 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 MS4A5Q9H3V2 200 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 UFSP2Q9NUQ7 469 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 CHD6Q8TD26 2715 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 DOPEY1Q5JWR5 2465 aa19.42■□□□□ 0.7
RBFOX1-206ENST00000535565 PRSS44E7EML9 344 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 SOCS1O15524 211 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 GOSR1O95249 250 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 IL7P13232 177 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 GABRR1P24046 479 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 MPPED2Q15777 294 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 BAK1Q16611 211 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 PIGYQ3MUY2 71 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 NHLRC3Q5JS37 347 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 C11orf53Q8IXP5 236 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 ITLN1Q8WWA0 313 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 EMG1Q92979 244 aaKnown RBP19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 ZNF488Q96MN9 340 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 FN3KRPQ9HA64 309 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 FAIMQ9NVQ4 179 aa19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 UBR5O95071 2799 aaPredicted RBP19.41■□□□□ 0.7
RBFOX1-206ENST00000535565 hCG_1807616A0A1W2PRN6 198 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 GABARAPH6UMI1 98 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 GSTZ1O43708 216 aaPredicted RBP19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 CSF3P09919 207 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 PRKACAP17612 351 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 BLVRBP30043 206 aaPredicted RBP19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 SNRPD2P62316 118 aaKnown RBP19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 ARL6IP1Q15041 203 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 TAF9Q16594 264 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 WDR82Q6UXN9 313 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 FAM58AQ8N1B3 248 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 POC1AQ8NBT0 407 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 SMIM4Q8WVI0 70 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 FCAMRQ8WWV6 532 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 AUNIPQ9H7T9 357 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 C1orf123Q9NWV4 160 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 FLNCQ14315 2725 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 FAM90A10PA6NDY2 464 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 FAM90A18PA6NE21 464 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 FAM90A16PA6NEW6 464 aa19.4■□□□□ 0.7
RBFOX1-206ENST00000535565 FAM90A20PA6NIJ5 464 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms