RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 CCNL2Q96S94 520 aaPredicted RBP12.13□□□□□ -0.47
LPCAT3-203ENST00000535479 PRRX2Q99811 253 aa12.13□□□□□ -0.47
LPCAT3-203ENST00000535479 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
LPCAT3-203ENST00000535479 RAB18Q9NP72 206 aa12.13□□□□□ -0.47
LPCAT3-203ENST00000535479 MYOZ1Q9NP98 299 aaPredicted RBP12.13□□□□□ -0.47
LPCAT3-203ENST00000535479 ALKBH4Q9NXW9 302 aa12.13□□□□□ -0.47
LPCAT3-203ENST00000535479 CACFD1Q9UGQ2 172 aa12.13□□□□□ -0.47
LPCAT3-203ENST00000535479 DOCK11Q5JSL3 2073 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 LILRA5A6NI73 299 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 HLA-GP17693 338 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 CFPP27918 469 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 PTGDSP41222 190 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 APOBEC1P41238 236 aaKnown RBP12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 DCAF7P61962 342 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 CLEC12BQ2HXU8 276 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 ABCA11PQ4W5N1 156 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 SPIN3Q5JUX0 258 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 UQCC3Q6UW78 93 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 YRDCQ86U90 279 aaKnown RBP12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 NTNG2Q96CW9 530 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 PAPOLGQ9BWT3 736 aaKnown RBP12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 ATPIF1Q9UII2 106 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 CARHSP1Q9Y2V2 147 aaKnown RBP12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 ICE1Q9Y2F5 2266 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 UMAD1C9J7I0 102 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 IGHMP01871 453 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 LCATP04180 440 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 CCR5P51681 352 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 HNRNPKP61978 463 aaKnown RBP eCLIP12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 RSU1Q15404 277 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 GUK1Q16774 197 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 C4orf17Q53FE4 359 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 ACER2Q5QJU3 275 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 SGPP2Q8IWX5 399 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 OR9K2Q8NGE7 335 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 THRSPQ92748 146 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 OCIAD1Q9NX40 245 aa12.12□□□□□ -0.47
LPCAT3-203ENST00000535479 A0A0G2JMM0 328 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 A0A1W2PPB8 328 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 A0A1W2PRS3 328 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 HSPB2A8KAH6 182 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 KIR3DP1A8MWS1 328 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 PRSS44E7EML9 344 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 CCL3P10147 92 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 EPHA1P21709 976 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 TAS2R31P59538 309 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 RPS16P62249 146 aaKnown RBP12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 POLR2GP62487 172 aaKnown RBP eCLIP12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 DCDP81605 110 aaKnown RBP12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 HOXA4Q00056 320 aaPredicted RBP12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 HSPB2Q16082 182 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 THEM4Q5T1C6 240 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 BTNL8Q6UX41 500 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 Q6ZPA2 131 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 PLXDC1Q8IUK5 500 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 RTN4IP1Q8WWV3 396 aaPredicted RBP12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 AQP10Q96PS8 301 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 RASL10BQ96S79 203 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 ZNF700Q9H0M5 742 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 CRIM1Q9NZV1 1036 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 MYOTQ9UBF9 498 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 WIF1Q9Y5W5 379 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 FABP1P07148 127 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 CD27P26842 260 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 GUCA1AP43080 201 aaPredicted RBP12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 NPBWR2P48146 333 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 B2MP61769 119 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 DEFB126Q9BYW3 111 aa12.11□□□□□ -0.47
LPCAT3-203ENST00000535479 C1orf196B1AJZ1 125 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 M0R135 149 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 TPPPO94811 219 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 CHRM2P08172 466 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 CSNK1A1P48729 337 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 CYCSP99999 105 aaKnown RBP12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 HLA-BQ31612 363 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 LHFPL1Q86WI0 220 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 NFAM1Q8NET5 270 aaPredicted RBP12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 PIGCQ92535 297 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 MR1Q95460 341 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 ZNF799Q96GE5 643 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 SMIM8Q96KF7 97 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 TRBV6-7A0A0A0MS04 114 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 IGKV1-12A0A0C4DH73 117 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 IGKV1D-12P01611 117 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 RPS18P62269 152 aaKnown RBP12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 VAX1Q5SQQ9 334 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 GFI1BQ5VTD9 330 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 RPUSD3Q6P087 351 aaKnown RBP12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 PRR18Q8N4B5 295 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 ARRDC1Q8N5I2 433 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 SLC22A8Q8TCC7 542 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 TNRC18O15417 2968 aaPredicted RBP12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 CEP250Q9BV73 2442 aa12.1□□□□□ -0.47
LPCAT3-203ENST00000535479 H0YL77 283 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms