RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 LINC01560Q8TB33 94 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 MS4A7Q9GZW8 240 aaPredicted RBP10.61□□□□□ -0.71
SCARB1-204ENST00000535005 MFFQ9GZY8 342 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 SCPEP1Q9HB40 452 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 ZNF281Q9Y2X9 895 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 AK6Q9Y3D8 172 aaKnown RBP10.61□□□□□ -0.71
SCARB1-204ENST00000535005 RTTNQ86VV8 2226 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 FXYD6-FXYD2A0A087WZ82 144 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 F5H5K5 113 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 H7C417 338 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 M0R135 149 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 ZNF35P13682 527 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 ANXA7P20073 488 aaKnown RBP10.61□□□□□ -0.71
SCARB1-204ENST00000535005 PTAFRP25105 342 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 PRKXP51817 358 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 TBC1D28Q2M2D7 210 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 COLCA1Q6ZS62 124 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 WFDC8Q8IUA0 241 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 DMRTC2Q8IXT2 367 aaPredicted RBP10.61□□□□□ -0.71
SCARB1-204ENST00000535005 ZNF799Q96GE5 643 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 FXYD6Q9H0Q3 95 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 FAM206AQ9NX38 181 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 MTFP1Q9UDX5 166 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 R4GMQ9 66 aa10.61□□□□□ -0.71
SCARB1-204ENST00000535005 TENM4Q6N022 2769 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 A0A0B4J203 849 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 TMEM269A0A1B0GVZ9 245 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 C5orf49A4QMS7 147 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 C19orf84I3L1E1 186 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 J3QW42 95 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 M0R1B8 84 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 RBBP9O75884 186 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 OR2F2O95006 317 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 CX3CR1P49238 355 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 TAS2R20P59543 309 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 OR2F1Q13607 317 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 TMEM108Q6UXF1 575 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 IZUMO1Q8IYV9 350 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 ZNF283Q8N7M2 679 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 OR13C5Q8NGS8 318 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 SYNPRQ8TBG9 265 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 FAM222BQ8WU58 562 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 OR14A2Q96R54 314 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 GINS4Q9BRT9 223 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 C1QTNF5Q9BXJ0 243 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 MOB1AQ9H8S9 216 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 NOX4Q9NPH5 578 aa10.6□□□□□ -0.71
SCARB1-204ENST00000535005 SPTAN1Q13813 2472 aaKnown RBP10.6□□□□□ -0.71
SCARB1-204ENST00000535005 IGHV2OR16-5A0A0B4J2B6 119 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 DPRXA6NFQ7 191 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 H3BUI4 141 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 LGALS8O00214 317 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 XRCC3O43542 346 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 RPP14O95059 124 aaKnown RBP10.59□□□□□ -0.71
SCARB1-204ENST00000535005 PNPP00491 289 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 CD8AP01732 235 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 IFNA4P05014 189 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 SLC25A4P12235 298 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 CD40P25942 277 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 ZNF121P58317 390 aaPredicted RBP10.59□□□□□ -0.71
SCARB1-204ENST00000535005 NAAAQ02083 359 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 HGFACQ04756 655 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 MICBQ29980 383 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 CATSPERDQ86XM0 798 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 PAQR4Q8N4S7 273 aaPredicted RBP10.59□□□□□ -0.71
SCARB1-204ENST00000535005 KCNRGQ8N5I3 272 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 OR10K1Q8NGX5 313 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 OR2G2Q8NGZ5 317 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 ST8SIA2Q92186 375 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 C4orf45Q96LM5 186 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 DERL3Q96Q80 235 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 CDH20Q9HBT6 801 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 G6PC2Q9NQR9 355 aa10.59□□□□□ -0.71
SCARB1-204ENST00000535005 CRYAAP02489 173 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 VSIG10L2P0DP72 767 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 CCL2P13500 99 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 PSMB10P40306 273 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 H2BFSP57053 126 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 NANOS3P60323 173 aaKnown RBP10.58□□□□□ -0.72
SCARB1-204ENST00000535005 ALKBH1Q13686 389 aaKnown RBP10.58□□□□□ -0.72
SCARB1-204ENST00000535005 SNTB1Q13884 538 aaKnown RBP10.58□□□□□ -0.72
SCARB1-204ENST00000535005 BEX5Q5H9J7 111 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 NCMAPQ5T1S8 102 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 ALKBH2Q6NS38 261 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 NAA40Q86UY6 237 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 C1orf174Q8IYL3 243 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 SVBPQ8N300 66 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 GFI1Q99684 422 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 SPOCK3Q9BQ16 436 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 ESRP2Q9H6T0 727 aaKnown RBP10.58□□□□□ -0.72
SCARB1-204ENST00000535005 BARX1Q9HBU1 254 aaPredicted RBP10.58□□□□□ -0.72
SCARB1-204ENST00000535005 BIN3Q9NQY0 253 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 MRPL15Q9P015 296 aaKnown RBP10.58□□□□□ -0.72
SCARB1-204ENST00000535005 MBD2Q9UBB5 411 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 KLK11Q9UBX7 282 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 OR5V1Q9UGF6 321 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 ZNF107Q9UII5 783 aaPredicted RBP10.58□□□□□ -0.72
SCARB1-204ENST00000535005 KANTRA0A1W2PQU2 76 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 POM121CA8CG34 1229 aa10.58□□□□□ -0.72
SCARB1-204ENST00000535005 FAM25EA8MYX2 175 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms