RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TUSC1Q2TAM9 212 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 SMIM21Q3B7S5 101 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 C6orf141Q5SZD1 244 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 AHSA2Q719I0 299 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 BTN2A1Q7KYR7 527 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 SDSLQ96GA7 329 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 MED30Q96HR3 178 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 ANKRD60Q9BZ19 345 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 CHCHD3Q9NX63 227 aaKnown RBP16.93■□□□□ 0.3
CCS-208ENST00000533244 COL6A5A8TX70 2615 aa16.93■□□□□ 0.3
CCS-208ENST00000533244 NDUFB3O43676 98 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 ATP6V1G2O95670 118 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 MYF6P23409 242 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 C21orf33P30042 268 aaPredicted RBP16.92■□□□□ 0.3
CCS-208ENST00000533244 LY6G5BQ8NDX9 201 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 GATAD2BQ8WXI9 593 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 ST8SIA4Q92187 359 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 SMIM19Q96E16 107 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 DMRTB1Q96MA1 342 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 OPALINQ96PE5 141 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 MTCH1Q9NZJ7 389 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 RPUSD1Q9UJJ7 312 aaKnown RBP16.92■□□□□ 0.3
CCS-208ENST00000533244 MAB21L2Q9Y586 359 aa16.92■□□□□ 0.3
CCS-208ENST00000533244 SLC1A7O00341 560 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 ATP1B3P54709 279 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 IKZF1Q13422 519 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 LRRC10Q5BKY1 277 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 ARMCX4Q5H9R4 360 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 DMKNQ6E0U4 476 aaPredicted RBP16.91■□□□□ 0.3
CCS-208ENST00000533244 CRIP3Q6Q6R5 217 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 LHFPL2Q6ZUX7 228 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 PNLDC1Q8NA58 520 aaKnown RBP16.91■□□□□ 0.3
CCS-208ENST00000533244 OR13C9Q8NGT0 318 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 ZCCHC4Q9H5U6 513 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 DHDHQ9UQ10 334 aa16.91■□□□□ 0.3
CCS-208ENST00000533244 ZNF879B4DU55 563 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 NXPH2O95156 264 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 MMP9P14780 707 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 CAV3P56539 151 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 FGF12P61328 243 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 RNLSQ5VYX0 342 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 ASPHD2Q6ICH7 369 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 ZNF529Q6P280 563 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 IZUMO2Q6UXV1 221 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 SLC25A26Q70HW3 274 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 SERPINA12Q8IW75 414 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 STX19Q8N4C7 294 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 CD177Q8N6Q3 437 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 C8orf46Q8TAG6 207 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 GPR148Q8TDV2 347 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 CEP19Q96LK0 163 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 DCTN5Q9BTE1 182 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 NUP50Q9UKX7 468 aa16.9■□□□□ 0.3
CCS-208ENST00000533244 RFPL4AA6NLU0 287 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 RFPL4AL1F8VTS6 287 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 F8VVB4 439 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 F8VWA3 439 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 KNG1P01042 644 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 CDK1P06493 297 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 GABRA2P47869 451 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 HSPA13P48723 471 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 MTCP1P56278 107 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 DOC2BQ14184 412 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 ZNRF1Q8ND25 227 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 OR5D14Q8NGL3 314 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 TSEN15Q8WW01 171 aaKnown RBP16.89■□□□□ 0.29
CCS-208ENST00000533244 SLAMF9Q96A28 289 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 PGLYRP3Q96LB9 341 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 MDFIQ99750 246 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 SIRPDQ9H106 197 aa16.89■□□□□ 0.29
CCS-208ENST00000533244 SLC25A10Q9UBX3 287 aaPredicted RBP16.89■□□□□ 0.29
CCS-208ENST00000533244 A0A0A6YYJ9 748 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 TCF21O43680 179 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 SULT1B1O43704 296 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 PLATP00750 562 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 IGHV4-38-2P0DP08 117 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 PRDX2P32119 198 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 USP43Q70EL4 1123 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 RNF144BQ7Z419 303 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 BATF2Q8N1L9 274 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 NANOGP1Q8N7R0 232 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 PAK1IP1Q9NWT1 392 aaPredicted RBP16.88■□□□□ 0.29
CCS-208ENST00000533244 ZNF281Q9Y2X9 895 aa16.88■□□□□ 0.29
CCS-208ENST00000533244 MYL12BO14950 172 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 WNT4P56705 351 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 TAS2R43P59537 309 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 SLC35A2P78381 396 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 PDZK1IP1Q13113 114 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 C9orf139Q6ZV77 190 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 MKXQ8IYA7 352 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 Q8IYB0 196 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 ZNF561Q8N587 486 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 GHSRQ92847 366 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 WDFY2Q96P53 400 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 TBX15Q96SF7 602 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 CDCA4Q9BXL8 241 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 OCEL1Q9H607 264 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 CNTD2Q9H8S5 307 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 NEK6Q9HC98 313 aa16.87■□□□□ 0.29
CCS-208ENST00000533244 ZNF69Q9UC07 566 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms