RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SPACA5Q96QH8 159 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 GAL3ST1Q99999 423 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 DCUN1D5Q9BTE7 237 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 WDR12Q9GZL7 423 aaKnown RBP9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 HMG20AQ9NP66 347 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 PCDHB10Q9UN67 800 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 VPS13CQ709C8 3753 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 ARID1AO14497 2285 aa9.43□□□□□ -0.9
TRAPPC4-211ENST00000533012 TRAPPC2LH3BP13 241 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 SMAD7O15105 426 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 SPRY1O43609 319 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 AIREO43918 545 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 PGA5P0DJD9 388 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 TMEM225BP0DP42 221 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 EGR1P18146 543 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 CPT2P23786 658 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 CD80P33681 288 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 SOX6P35712 828 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 POU3F4P49335 361 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZNF404Q494X3 552 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 FAM27D1Q5T7N8 215 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 TEX36Q5VZQ5 186 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 CD200R1LQ6Q8B3 271 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 SAXO1Q8IYX7 474 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 CIARTQ8N365 385 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 NKAIN3Q8N8D7 197 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 PNLDC1Q8NA58 520 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZSCAN4Q8NAM6 433 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 POC1AQ8NBT0 407 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 MAPK1IP1LQ8NDC0 245 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 C19orf18Q8NEA5 215 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 CLDND2Q8NHS1 167 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 FOXRED1Q96CU9 486 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 C18orf12Q96KH6 178 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 CEP19Q96LK0 163 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 TMEM246Q9BRR3 403 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 WDR13Q9H1Z4 485 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 PPIL3Q9H2H8 161 aaKnown RBP9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 SNTG1Q9NSN8 517 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 MTCH1Q9NZJ7 389 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 DNAJB11Q9UBS4 358 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 MIOXQ9UGB7 285 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 STUB1Q9UNE7 303 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 SSR3Q9UNL2 185 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 GSTK1Q9Y2Q3 226 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 A3GALT2U3KPV4 340 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 OTOGQ6ZRI0 2925 aa9.42□□□□□ -0.9
TRAPPC4-211ENST00000533012 MAP1AP78559 2803 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 CCDC168Q8NDH2 2452 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 IGHV3OR15-7A0A075B7D8 119 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 A0A096LNT2 108 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 NXPH2O95156 264 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 FOSL1P15407 271 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 PTGFRP43088 359 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 HOXA4Q00056 320 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 GLT8D1Q68CQ7 371 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 DCDC5Q6ZRR9 648 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 RNF144BQ7Z419 303 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 Q8IYB0 196 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 JAGN1Q8N5M9 183 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 OR5D18Q8NGL1 313 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 TNFAIP8L1Q8WVP5 186 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 SLAMF9Q96A28 289 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 RAB39BQ96DA2 213 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZNF488Q96MN9 340 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 S100A13Q99584 98 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 NRIP2Q9BQI9 281 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 ELL3Q9HB65 397 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 PATZ1Q9HBE1 687 aaKnown RBP9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 SMURF1Q9HCE7 757 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 EXOSC4Q9NPD3 245 aaKnown RBP9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 NLKQ9UBE8 527 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 ING4Q9UNL4 249 aa9.41□□□□□ -0.9
TRAPPC4-211ENST00000533012 CEACAM18A8MTB9 384 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 ANGPTL7O43827 346 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 GYPAP02724 150 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 INHBBP09529 407 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 WNT2P09544 360 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 FGF9P31371 208 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 PSMD7P51665 324 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZP1P60852 638 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 ERVK11-1P61568 191 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 LMO4P61968 165 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 ZNF846Q147U1 533 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 CTF1Q16619 201 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 TMEM249Q2WGJ8 235 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 SMIM21Q3B7S5 101 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 C22orf42Q6IC83 251 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 CRIP3Q6Q6R5 217 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 FIP1L1Q6UN15 594 aaKnown RBP9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 ACP7Q6ZNF0 438 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 SLC16A12Q6ZSM3 486 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 NLRC3Q7RTR2 1065 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 LRRTM1Q86UE6 522 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 FAM90A1Q86YD7 464 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 PXT1Q8NFP0 134 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 OR5T2Q8NGG2 359 aa9.4□□□□□ -0.9
TRAPPC4-211ENST00000533012 SEH1LQ96EE3 360 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms