RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PDS5BQ9NTI5 1447 aa3.18□□□□□ -1.9
AC055878.1-201ENST00000531858 TRIP12Q14669 1992 aaPredicted RBP3.18□□□□□ -1.9
AC055878.1-201ENST00000531858 NFASCO94856 1347 aa3.18□□□□□ -1.9
AC055878.1-201ENST00000531858 AK9Q5TCS8 1911 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 SNAPC4Q5SXM2 1469 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 IGHV3-74A0A0B4J1X5 117 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 A0A0U1RQV1 116 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 OR5K4A6NMS3 321 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 H3BQV1 296 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 KPNA3O00505 521 aaPredicted RBP3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 MOSP00540 346 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 HLA-DPB1P04440 258 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 CFL1P23528 166 aaKnown RBP3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 CDKN2DP55273 166 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 TAS2R46P59540 309 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 ARG2P78540 354 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 PRDX1Q06830 199 aaKnown RBP3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 GINS1Q14691 196 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 HERPUD1Q15011 391 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 PTGES3Q15185 160 aaKnown RBP3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 IRF4Q15306 451 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 RSPO1Q2MKA7 263 aaPredicted RBP3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 HIGD2BQ4VC39 106 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 ORMDL2Q53FV1 153 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 ZC2HC1BQ5TFG8 222 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 TMEM236Q5W0B7 351 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 ZNF343Q6P1L6 599 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 CLEC19AQ6UXS0 136 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 C18orf65Q6ZTR6 163 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 FAM92BQ6ZTR7 304 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 FAM231DQ6ZW35 169 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 ZFP82Q8N141 532 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 Q8N9P0 234 aaPredicted RBP3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 WDSUB1Q8N9V3 476 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 RXFP4Q8TDU9 374 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 CASTOR1Q8WTX7 329 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 ASB13Q8WXK3 278 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 IMP4Q96G21 291 aaKnown RBP3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 MAGEB18Q96M61 343 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 SDHCQ99643 169 aaPredicted RBP3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 PRRT1Q99946 306 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 TAPBPLQ9BX59 468 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 SLC19A3Q9BZV2 496 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 TLNRD1Q9H1K6 362 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 OR51B6Q9H340 312 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 TMEM9Q9P0T7 183 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 NUFIP1Q9UHK0 495 aaKnown RBP3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 OPN4Q9UHM6 478 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 PROCRQ9UNN8 238 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 PSG8Q9UQ74 426 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 HEBP2Q9Y5Z4 205 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 MYH15Q9Y2K3 1946 aa3.17□□□□□ -1.9
AC055878.1-201ENST00000531858 TNRQ92752 1358 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 THSD7BQ9C0I4 1608 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 PHF3Q92576 2039 aaKnown RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 A0A087WWV3 80 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 TRAV8-2A0A0B4J237 113 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 A0A1B0GXF2 115 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 F5H5T6 163 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 DNASE2O00115 360 aaPredicted RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 UPK1AO00322 258 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 MANBAO00462 879 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 RP2O75695 350 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 GATBO75879 557 aaKnown RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 KLF8O95600 359 aaPredicted RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 CD74P04233 296 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 HSPB1P04792 205 aaKnown RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 GIPP09681 153 aaPredicted RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 TAC1P20366 129 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 MSNP26038 577 aaKnown RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 HTR1EP28566 365 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 PRSS3P35030 304 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 RCVRNP35243 200 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 LGALS7P47929 136 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 SULT1A1P50225 295 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 SULT1A2P50226 295 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 C4orf26Q17RF5 130 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 FAM131AQ6UXB0 335 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 LYPD2Q6UXB3 125 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 CCDC121Q6ZUS5 278 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 NIT1Q86X76 327 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 C14orf178Q8N769 122 aaPredicted RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 POM121L12Q8N7R1 296 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 CCNYL1Q8N7R7 359 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 KLHL30-AS1Q8NEE0 82 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 GPR32P1Q8NGA4 272 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 OR13G1Q8NGZ3 307 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 BLOC1S5Q8TDH9 187 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 RPUSD4Q96CM3 377 aaKnown RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 TMEM101Q96IK0 257 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 SAMD10Q9BYL1 202 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 MS4A6AQ9H2W1 248 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 MAP1LC3AQ9H492 121 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 SLCO1B3Q9NPD5 702 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 UBQLN4Q9NRR5 601 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 PAQR5Q9NXK6 330 aaPredicted RBP3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 ARL2BPQ9Y2Y0 163 aa3.16□□□□□ -1.9
AC055878.1-201ENST00000531858 ARL5AQ9Y689 179 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms