RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CCDC157Q569K6 752 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 NHLRC3Q5JS37 347 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 C1QTNF12Q5T7M4 302 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 TSPO2Q5TGU0 170 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 RFPL4BQ6ZWI9 263 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 NUFIP2Q7Z417 695 aaKnown RBP4.82□□□□□ -1.64
PCF11-205ENST00000530906 PEG10Q86TG7 708 aaKnown RBP4.82□□□□□ -1.64
PCF11-205ENST00000530906 LINC00596Q86U02 117 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 TMEM200AQ86VY9 491 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 LHFPL1Q86WI0 220 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 TMEM251Q8N6I4 163 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 OR11H4Q8NGC9 324 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 OR5AP2Q8NGF4 316 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 COQ8AQ8NI60 647 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 ABHD3Q8WU67 409 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 NUDCD2Q8WVJ2 157 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 ROBO4Q8WZ75 1007 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 EMG1Q92979 244 aaKnown RBP4.82□□□□□ -1.64
PCF11-205ENST00000530906 DVL3Q92997 716 aaPredicted RBP4.82□□□□□ -1.64
PCF11-205ENST00000530906 PHYHIPLQ96FC7 376 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 ELMOD3Q96FG2 381 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 BOD1Q96IK1 185 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 SIGLEC12Q96PQ1 595 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 PECRQ9BY49 303 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 PRRG4Q9BZD6 226 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 PLK3Q9H4B4 646 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 HEXA-AS1Q9H8Q6 139 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 ZDHHC11Q9H8X9 412 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 BEX1Q9HBH7 125 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 RAB18Q9NP72 206 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 TUBG2Q9NRH3 451 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 DECR2Q9NUI1 292 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 MED9Q9NWA0 146 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 KIF25Q9UIL4 384 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 AUP1Q9Y679 476 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 R4GN57 208 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 NCKAP5O14513 1909 aa4.82□□□□□ -1.64
PCF11-205ENST00000530906 A0A0A6YYD4 124 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 TRGV5A0A0B4J1U4 118 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 C9orf170A2RU37 121 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 PMS2P1A4D2B8 440 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 ANKRD34BA5PLL1 514 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 MEIS3P1A6NDR6 274 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 WIPF3A6NGB9 483 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 OR5B21A6NL26 309 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SMLR1H3BR10 107 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SOCS1O15524 211 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SS18L1O75177 396 aaPredicted RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 B3GALNT1O75752 331 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 CST4P01036 141 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 IGHG3P01860 377 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 GLAP06280 429 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 CELA3BP08861 270 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 PET100P0DJ07 73 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 TMEM225BP0DP42 221 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 ZNF35P13682 527 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 ACKR3P25106 362 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 MPGP29372 298 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 MAGEA5P43359 124 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 STARP49675 285 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 H2BFSP57053 126 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SNRPD2P62316 118 aaKnown RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 PPIAP62937 165 aaKnown RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 ARF1P84077 181 aaKnown RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 FAM3AP98173 230 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 TGFBR3Q03167 851 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 PDZK1IP1Q13113 114 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 MRPL49Q13405 166 aaKnown RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 OPCMLQ14982 345 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 MICBQ29980 383 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SNAI3Q3KNW1 292 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 CHRFAM7AQ494W8 412 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 ESCO2Q56NI9 601 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 ZNF766Q5HY98 468 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 PABPC1L2AQ5JQF8 200 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 PLAC9Q5JTB6 97 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 ELP2Q6IA86 826 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 CRIP3Q6Q6R5 217 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 IGFL2Q6UWQ7 119 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 UNQ6126/PRO20091Q6UXV3 157 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 C3P1Q6ZMU1 363 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 Q6ZS49 121 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 OVCH2Q7RTZ1 564 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 TMED4Q7Z7H5 227 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SLC51BQ86UW2 128 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SKA3Q8IX90 412 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 C1orf174Q8IYL3 243 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SLC7A5P1Q8MH63 180 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 LINC01356Q8N9X3 169 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 OR52B4Q8NGK2 314 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 OR5L1Q8NGL2 311 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 OR6K3Q8NGY3 331 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 ANGPTL6Q8NI99 470 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 GTF3AQ92664 365 aaKnown RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 GMPPAQ96IJ6 420 aaPredicted RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 ZNF845Q96IR2 970 aaPredicted RBP4.81□□□□□ -1.64
PCF11-205ENST00000530906 ARHGAP5-AS1Q96IT6 56 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 CHIAQ9BZP6 476 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 NMES1Q9C002 83 aa4.81□□□□□ -1.64
PCF11-205ENST00000530906 SLC6A15Q9H2J7 730 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms