RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 OPN1SWP03999 348 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 PGA4P0DJD7 388 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 PGA3P0DJD8 388 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 GPX2P18283 190 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 APLNRP35414 380 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 UCP2P55851 309 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 MAGOHP61326 146 aaKnown RBP5.37□□□□□ -1.55
CSDE1-213ENST00000530784 HSF2Q03933 536 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 ZP4Q12836 540 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 CYP51A1Q16850 503 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 HDDC2Q7Z4H3 204 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 NANOGNBQ7Z5D8 188 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 FUNDC1Q8IVP5 155 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 NOXO1Q8NFA2 376 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 OR6T1Q8NGN1 323 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 NANPQ8TBE9 248 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 ADAMTS16Q8TE57 1224 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 NPRL2Q8WTW4 380 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 RAB1CQ92928 201 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 HIST1H2ACQ93077 130 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 SLC6A7Q99884 636 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 CITED2Q99967 270 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-213ENST00000530784 GAL3ST1Q99999 423 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 SLC19A3Q9BZV2 496 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 TAS2R5Q9NYW4 299 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 CACNG2Q9Y698 323 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 MALRD1Q5VYJ5 2156 aa5.37□□□□□ -1.55
CSDE1-213ENST00000530784 A0A1W2PRG6 482 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 TRAPPC13A5PLN9 417 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 MGRN1O60291 552 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 NXPH4O95158 308 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 LYPD3O95274 346 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 IGHV1-46P01743 117 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 THY1P04216 161 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 ASAH2BP0C7U1 165 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 CCNOP22674 350 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 DUTP33316 252 aaKnown RBP5.36□□□□□ -1.55
CSDE1-213ENST00000530784 DAP3P51398 398 aaKnown RBP5.36□□□□□ -1.55
CSDE1-213ENST00000530784 SLC3A1Q07837 685 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 DUSP7Q16829 419 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 AGKQ53H12 422 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 PABPC1L2AQ5JQF8 200 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 SPATA46Q5T0L3 261 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 SH2D6Q7Z4S9 175 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 DHDDSQ86SQ9 333 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 SLC30A8Q8IWU4 369 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 LRRC18Q8N456 261 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 LINC00612Q8N6U2 182 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 LRRC17Q8N6Y2 441 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 SYT14Q8NB59 555 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 GPR32P1Q8NGA4 272 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 OR10G7Q8NGN6 311 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 C22orf15Q8WYQ4 148 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 CCL17Q92583 94 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 MCHR2Q969V1 340 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 NEDD4LQ96PU5 975 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 EBF4Q9BQW3 602 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 CCDC28BQ9BUN5 200 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 ZNF426Q9BUY5 554 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 NTN4Q9HB63 628 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 CCNB1IP1Q9NPC3 277 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 DDX28Q9NUL7 540 aaKnown RBP5.36□□□□□ -1.55
CSDE1-213ENST00000530784 UBAP1Q9NZ09 502 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 STX18Q9P2W9 335 aaKnown RBP5.36□□□□□ -1.55
CSDE1-213ENST00000530784 EIF3KQ9UBQ5 218 aaKnown RBP5.36□□□□□ -1.55
CSDE1-213ENST00000530784 NUP214P35658 2090 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-213ENST00000530784 ALPK2Q86TB3 2170 aa5.36□□□□□ -1.55
CSDE1-213ENST00000530784 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.35□□□□□ -1.55
CSDE1-213ENST00000530784 GMNCA6NCL1 334 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 ZSCAN5BA6NJL1 495 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 CENPBD1B2RD01 187 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 M0QX08 132 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 ANGPT2O15123 496 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 SAP30O75446 220 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 FOXH1O75593 365 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 TGDSO95455 350 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 SLC2A10O95528 541 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 MMP7P09237 267 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-213ENST00000530784 NR2C1P13056 603 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 ZNF32P17041 273 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 STOMP27105 288 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 MPV17P39210 176 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 OR3A3P47888 321 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 GDI2P50395 445 aaKnown RBP5.35□□□□□ -1.55
CSDE1-213ENST00000530784 ATP4BP51164 291 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 UGT2B15P54855 530 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 MTPNP58546 118 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 UBA52P62987 128 aaKnown RBP5.35□□□□□ -1.55
CSDE1-213ENST00000530784 LCN2P80188 198 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 RPL18Q07020 188 aaKnown RBP5.35□□□□□ -1.55
CSDE1-213ENST00000530784 HIST3H3Q16695 136 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 ARMCX4Q5H9R4 360 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 C10orf128Q5T292 105 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 DLEU7Q6UYE1 221 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 TMEM182Q6ZP80 229 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-213ENST00000530784 RBM45Q8IUH3 476 aaKnown RBP5.35□□□□□ -1.55
CSDE1-213ENST00000530784 ZNF101Q8IZC7 436 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 ZDHHC22Q8N966 263 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 OR4D11Q8NGI4 311 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 SLC25A40Q8TBP6 338 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms